Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 KRT16P5-201ENST00000455284 522 ntBASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
H3F3CQ6NXT2 NBPF21P-201ENST00000425093 1451 ntBASIC18.39■□□□□ 0.54
H3F3CQ6NXT2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 DPP3P2-201ENST00000416030 1696 ntBASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 AC092720.2-201ENST00000602388 1665 ntBASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 AL049637.2-201ENST00000641778 930 ntBASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H3F3CQ6NXT2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 SNORA78-201ENST00000459373 127 ntBASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.38■□□□□ 0.53
H3F3CQ6NXT2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.37■□□□□ 0.53
H3F3CQ6NXT2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
H3F3CQ6NXT2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms