Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 B3GAT3P1-201ENST00000471720 806 ntBASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 NAPSB-206ENST00000562112 1266 ntBASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 AC092720.2-201ENST00000602388 1665 ntBASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC18Q5T9S5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 AC004980.1-204ENST00000429707 299 ntBASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC18Q5T9S5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 TERF1P1-201ENST00000311003 1181 ntBASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 AL445228.2-201ENST00000605589 952 ntBASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.89■■■□□ 2.53
CCDC18Q5T9S5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 LINC01568-207ENST00000641790 1380 ntBASIC30.88■■■□□ 2.53
CCDC18Q5T9S5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 SLC25A3P1-201ENST00000443844 931 ntBASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 FSCN1P1-201ENST00000568912 1481 ntBASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 GOLGA6L3-201ENST00000507199 1679 ntBASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC18Q5T9S5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC18Q5T9S5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 WWC2-AS2-201ENST00000578387 2183 ntBASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC18Q5T9S5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 AC005521.1-201ENST00000393351 872 ntBASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC18Q5T9S5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms