Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCL20P78556 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL20P78556 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL20P78556 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL20P78556 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL20P78556 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 AC068880.1-201ENST00000507289 2297 ntBASIC15.65■□□□□ 0.1
CCL20P78556 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCL20P78556 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCL20P78556 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL20P78556 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL20P78556 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL20P78556 ABHD17AP5-201ENST00000580133 923 ntBASIC15.65■□□□□ 0.1
CCL20P78556 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL20P78556 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL20P78556 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL20P78556 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
CCL20P78556 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL20P78556 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL20P78556 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL20P78556 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
CCL20P78556 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 NOC2LP2-201ENST00000407594 1944 ntBASIC15.64■□□□□ 0.09
CCL20P78556 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL20P78556 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCL20P78556 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL20P78556 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL20P78556 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CCL20P78556 KRT125P-201ENST00000546827 989 ntBASIC15.64■□□□□ 0.09
CCL20P78556 AL033527.3-201ENST00000566366 1196 ntBASIC15.64■□□□□ 0.09
CCL20P78556 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCL20P78556 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL20P78556 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CCL20P78556 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCL20P78556 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL20P78556 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL20P78556 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCL20P78556 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CCL20P78556 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL20P78556 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCL20P78556 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL20P78556 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL20P78556 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL20P78556 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL20P78556 MIR4787-201ENST00000607364 84 ntBASIC15.63■□□□□ 0.09
CCL20P78556 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CCL20P78556 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL20P78556 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL20P78556 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL20P78556 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL20P78556 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL20P78556 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL20P78556 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL20P78556 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL20P78556 AC009237.3-201ENST00000393279 1427 ntBASIC15.62■□□□□ 0.09
CCL20P78556 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL20P78556 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL20P78556 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms