Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAE1P78406 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAE1P78406 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.9■□□□□ 0.62
RAE1P78406 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 AP001271.2-201ENST00000624018 1556 ntBASIC18.89■□□□□ 0.62
RAE1P78406 PHGDH-210ENST00000641115 1638 ntBASIC18.89■□□□□ 0.62
RAE1P78406 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAE1P78406 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RAE1P78406 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAE1P78406 NCF1B-203ENST00000435988 1254 ntBASIC18.89■□□□□ 0.61
RAE1P78406 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.89■□□□□ 0.61
RAE1P78406 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.89■□□□□ 0.61
RAE1P78406 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAE1P78406 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.89■□□□□ 0.61
RAE1P78406 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.89■□□□□ 0.61
RAE1P78406 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.88■□□□□ 0.61
RAE1P78406 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.88■□□□□ 0.61
RAE1P78406 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.88■□□□□ 0.61
RAE1P78406 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAE1P78406 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RAE1P78406 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.88■□□□□ 0.61
RAE1P78406 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.88■□□□□ 0.61
RAE1P78406 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAE1P78406 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.87■□□□□ 0.61
RAE1P78406 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.87■□□□□ 0.61
RAE1P78406 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.87■□□□□ 0.61
RAE1P78406 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAE1P78406 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.87■□□□□ 0.61
RAE1P78406 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAE1P78406 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAE1P78406 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.87■□□□□ 0.61
RAE1P78406 DUSP5P2-201ENST00000426873 1033 ntBASIC18.87■□□□□ 0.61
RAE1P78406 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.87■□□□□ 0.61
RAE1P78406 TSPY6P-201ENST00000448518 926 ntBASIC18.87■□□□□ 0.61
RAE1P78406 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.87■□□□□ 0.61
RAE1P78406 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.87■□□□□ 0.61
RAE1P78406 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.87■□□□□ 0.61
RAE1P78406 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAE1P78406 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.87■□□□□ 0.61
RAE1P78406 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.87■□□□□ 0.61
RAE1P78406 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAE1P78406 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAE1P78406 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAE1P78406 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
RAE1P78406 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAE1P78406 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RAE1P78406 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAE1P78406 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAE1P78406 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.86■□□□□ 0.61
RAE1P78406 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.86■□□□□ 0.61
RAE1P78406 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.86■□□□□ 0.61
RAE1P78406 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.86■□□□□ 0.61
RAE1P78406 AC092118.2-201ENST00000613495 667 ntBASIC18.86■□□□□ 0.61
RAE1P78406 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RAE1P78406 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAE1P78406 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.86■□□□□ 0.61
RAE1P78406 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAE1P78406 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.85■□□□□ 0.61
RAE1P78406 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms