Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS3AP61247 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPS3AP61247 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.58■□□□□ 0.56
RPS3AP61247 RARRES2P4-201ENST00000514074 484 ntBASIC18.58■□□□□ 0.56
RPS3AP61247 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPS3AP61247 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RPS3AP61247 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPS3AP61247 AP000974.1-201ENST00000623909 2387 ntBASIC18.57■□□□□ 0.56
RPS3AP61247 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RPS3AP61247 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RPS3AP61247 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
RPS3AP61247 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.57■□□□□ 0.56
RPS3AP61247 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RPS3AP61247 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS3AP61247 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS3AP61247 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 AC007225.1-201ENST00000566331 1836 ntBASIC18.57■□□□□ 0.56
RPS3AP61247 NEFHP1-201ENST00000412845 2629 ntBASIC18.57■□□□□ 0.56
RPS3AP61247 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS3AP61247 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS3AP61247 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.57■□□□□ 0.56
RPS3AP61247 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.57■□□□□ 0.56
RPS3AP61247 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS3AP61247 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS3AP61247 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS3AP61247 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 AC116050.2-201ENST00000612102 1779 ntBASIC18.56■□□□□ 0.56
RPS3AP61247 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 MKRN4P-201ENST00000444706 1521 ntBASIC18.56■□□□□ 0.56
RPS3AP61247 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.56■□□□□ 0.56
RPS3AP61247 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 TSPY6P-201ENST00000448518 926 ntBASIC18.56■□□□□ 0.56
RPS3AP61247 AC016405.3-201ENST00000607710 860 ntBASIC18.56■□□□□ 0.56
RPS3AP61247 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.56■□□□□ 0.56
RPS3AP61247 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RPS3AP61247 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
RPS3AP61247 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RPS3AP61247 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RPS3AP61247 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS3AP61247 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS3AP61247 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS3AP61247 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS3AP61247 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPS3AP61247 AC121338.2-201ENST00000622535 1744 ntBASIC18.55■□□□□ 0.56
RPS3AP61247 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RPS3AP61247 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RPS3AP61247 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPS3AP61247 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.55■□□□□ 0.56
RPS3AP61247 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RPS3AP61247 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS3AP61247 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS3AP61247 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RPS3AP61247 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.54■□□□□ 0.56
RPS3AP61247 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RPS3AP61247 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RPS3AP61247 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RPS3AP61247 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.54■□□□□ 0.56
RPS3AP61247 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.54■□□□□ 0.56
RPS3AP61247 AL355802.2-201ENST00000402069 882 ntBASIC18.54■□□□□ 0.56
RPS3AP61247 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.54■□□□□ 0.56
RPS3AP61247 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 AL162377.1-201ENST00000618844 1793 ntBASIC18.54■□□□□ 0.56
RPS3AP61247 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS3AP61247 AC099778.1-201ENST00000568593 1911 ntBASIC18.54■□□□□ 0.56
RPS3AP61247 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.54■□□□□ 0.56
RPS3AP61247 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RPS3AP61247 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms