Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
WNT3AP56704 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
WNT3AP56704 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3AP56704 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3AP56704 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3AP56704 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.11■□□□□ 0.81
WNT3AP56704 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
WNT3AP56704 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.11■□□□□ 0.81
WNT3AP56704 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3AP56704 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.11■□□□□ 0.81
WNT3AP56704 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.1■□□□□ 0.81
WNT3AP56704 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.1■□□□□ 0.81
WNT3AP56704 AC092368.3-202ENST00000574180 1591 ntBASIC20.1■□□□□ 0.81
WNT3AP56704 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.1■□□□□ 0.81
WNT3AP56704 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.1■□□□□ 0.81
WNT3AP56704 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.1■□□□□ 0.81
WNT3AP56704 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
WNT3AP56704 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.1■□□□□ 0.81
WNT3AP56704 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.1■□□□□ 0.81
WNT3AP56704 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 AC006557.6-201ENST00000623071 864 ntBASIC20.1■□□□□ 0.81
WNT3AP56704 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.1■□□□□ 0.81
WNT3AP56704 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3AP56704 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
WNT3AP56704 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.09■□□□□ 0.81
WNT3AP56704 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.09■□□□□ 0.81
WNT3AP56704 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.09■□□□□ 0.81
WNT3AP56704 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.09■□□□□ 0.81
WNT3AP56704 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
WNT3AP56704 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.09■□□□□ 0.81
WNT3AP56704 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.09■□□□□ 0.81
WNT3AP56704 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.09■□□□□ 0.81
WNT3AP56704 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.09■□□□□ 0.81
WNT3AP56704 AC060766.5-201ENST00000590539 871 ntBASIC20.09■□□□□ 0.81
WNT3AP56704 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
WNT3AP56704 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.09■□□□□ 0.81
WNT3AP56704 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3AP56704 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.09■□□□□ 0.81
WNT3AP56704 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
WNT3AP56704 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.08■□□□□ 0.81
WNT3AP56704 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.08■□□□□ 0.81
WNT3AP56704 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
WNT3AP56704 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.08■□□□□ 0.81
WNT3AP56704 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.08■□□□□ 0.81
WNT3AP56704 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.08■□□□□ 0.81
WNT3AP56704 PNMA6B-201ENST00000538162 1200 ntBASIC20.08■□□□□ 0.81
WNT3AP56704 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.08■□□□□ 0.81
WNT3AP56704 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.08■□□□□ 0.81
WNT3AP56704 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.08■□□□□ 0.81
WNT3AP56704 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3AP56704 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
WNT3AP56704 PHGDH-210ENST00000641115 1638 ntBASIC20.08■□□□□ 0.8
WNT3AP56704 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
WNT3AP56704 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.08■□□□□ 0.8
WNT3AP56704 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
WNT3AP56704 AC009237.14-201ENST00000609975 1594 ntBASIC20.08■□□□□ 0.8
WNT3AP56704 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.08■□□□□ 0.8
WNT3AP56704 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
WNT3AP56704 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.07■□□□□ 0.8
WNT3AP56704 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 AC125437.2-201ENST00000625180 2167 ntBASIC20.07■□□□□ 0.8
WNT3AP56704 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.07■□□□□ 0.8
WNT3AP56704 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.07■□□□□ 0.8
WNT3AP56704 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.07■□□□□ 0.8
WNT3AP56704 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3AP56704 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3AP56704 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms