Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 AC093787.1-201ENST00000450396 207 ntBASIC19.21■□□□□ 0.67
CLCN2P51788 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN2P51788 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN2P51788 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN2P51788 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLCN2P51788 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN2P51788 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.21■□□□□ 0.67
CLCN2P51788 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 AC116050.2-201ENST00000612102 1779 ntBASIC19.21■□□□□ 0.67
CLCN2P51788 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCN2P51788 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCN2P51788 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.2■□□□□ 0.66
CLCN2P51788 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLCN2P51788 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCN2P51788 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CLCN2P51788 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN2P51788 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLCN2P51788 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CLCN2P51788 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLCN2P51788 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CLCN2P51788 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCN2P51788 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 AC005332.7-201ENST00000614046 2005 ntBASIC19.19■□□□□ 0.66
CLCN2P51788 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCN2P51788 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLCN2P51788 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCN2P51788 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCN2P51788 AC142086.2-201ENST00000569753 217 ntBASIC19.19■□□□□ 0.66
CLCN2P51788 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCN2P51788 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCN2P51788 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCN2P51788 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN2P51788 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 AC010980.2-201ENST00000587099 1412 ntBASIC19.18■□□□□ 0.66
CLCN2P51788 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCN2P51788 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN2P51788 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLCN2P51788 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCN2P51788 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN2P51788 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN2P51788 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCN2P51788 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN2P51788 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCN2P51788 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLCN2P51788 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN2P51788 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CLCN2P51788 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLCN2P51788 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 MIPEPP3-201ENST00000412105 444 ntBASIC19.17■□□□□ 0.66
CLCN2P51788 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.17■□□□□ 0.66
CLCN2P51788 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCN2P51788 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.17■□□□□ 0.66
CLCN2P51788 AC100791.3-201ENST00000617619 330 ntBASIC19.17■□□□□ 0.66
CLCN2P51788 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLCN2P51788 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCN2P51788 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCN2P51788 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLCN2P51788 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN2P51788 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms