Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CENPAP49450 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CENPAP49450 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CENPAP49450 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CENPAP49450 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CENPAP49450 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.98■□□□□ 0.47
CENPAP49450 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.98■□□□□ 0.47
CENPAP49450 KRT18P11-201ENST00000435214 1283 ntBASIC17.98■□□□□ 0.47
CENPAP49450 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.98■□□□□ 0.47
CENPAP49450 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.98■□□□□ 0.47
CENPAP49450 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CENPAP49450 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.97■□□□□ 0.47
CENPAP49450 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.97■□□□□ 0.47
CENPAP49450 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.97■□□□□ 0.47
CENPAP49450 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
CENPAP49450 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.97■□□□□ 0.47
CENPAP49450 AL162412.1-201ENST00000567129 965 ntBASIC17.97■□□□□ 0.47
CENPAP49450 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.97■□□□□ 0.47
CENPAP49450 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CENPAP49450 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.96■□□□□ 0.47
CENPAP49450 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CENPAP49450 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CENPAP49450 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.96■□□□□ 0.47
CENPAP49450 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.96■□□□□ 0.47
CENPAP49450 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.96■□□□□ 0.47
CENPAP49450 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CENPAP49450 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.96■□□□□ 0.47
CENPAP49450 KRT18P5-201ENST00000436075 1291 ntBASIC17.96■□□□□ 0.47
CENPAP49450 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.96■□□□□ 0.47
CENPAP49450 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.96■□□□□ 0.47
CENPAP49450 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.96■□□□□ 0.47
CENPAP49450 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CENPAP49450 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CENPAP49450 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.96■□□□□ 0.47
CENPAP49450 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CENPAP49450 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CENPAP49450 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CENPAP49450 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.96■□□□□ 0.47
CENPAP49450 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
CENPAP49450 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.95■□□□□ 0.46
CENPAP49450 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
CENPAP49450 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.95■□□□□ 0.46
CENPAP49450 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CENPAP49450 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CENPAP49450 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.95■□□□□ 0.46
CENPAP49450 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.95■□□□□ 0.46
CENPAP49450 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.95■□□□□ 0.46
CENPAP49450 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.95■□□□□ 0.46
CENPAP49450 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.95■□□□□ 0.46
CENPAP49450 AL356652.1-201ENST00000615962 565 ntBASIC17.95■□□□□ 0.46
CENPAP49450 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.95■□□□□ 0.46
CENPAP49450 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.95■□□□□ 0.46
CENPAP49450 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.95■□□□□ 0.46
CENPAP49450 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CENPAP49450 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CENPAP49450 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.95■□□□□ 0.46
CENPAP49450 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CENPAP49450 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CENPAP49450 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CENPAP49450 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms