Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX6P35712 AL691432.2-201ENST00000607222 2038 ntBASIC17.81■□□□□ 0.44
SOX6P35712 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.81■□□□□ 0.44
SOX6P35712 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX6P35712 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX6P35712 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX6P35712 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.81■□□□□ 0.44
SOX6P35712 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.81■□□□□ 0.44
SOX6P35712 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX6P35712 AC005332.8-201ENST00000622750 2735 ntBASIC17.81■□□□□ 0.44
SOX6P35712 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SOX6P35712 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SOX6P35712 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX6P35712 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SOX6P35712 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX6P35712 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX6P35712 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX6P35712 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SOX6P35712 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX6P35712 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.8■□□□□ 0.44
SOX6P35712 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX6P35712 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.8■□□□□ 0.44
SOX6P35712 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SOX6P35712 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX6P35712 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX6P35712 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SOX6P35712 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SOX6P35712 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 AL136116.3-201ENST00000402907 1138 ntBASIC17.79■□□□□ 0.44
SOX6P35712 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.79■□□□□ 0.44
SOX6P35712 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SOX6P35712 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX6P35712 AC092171.4-201ENST00000609130 632 ntBASIC17.79■□□□□ 0.44
SOX6P35712 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SOX6P35712 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX6P35712 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX6P35712 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX6P35712 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX6P35712 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SOX6P35712 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX6P35712 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 AC010525.1-201ENST00000585559 441 ntBASIC17.78■□□□□ 0.44
SOX6P35712 MIR4466-201ENST00000606121 54 ntBASIC17.78■□□□□ 0.44
SOX6P35712 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SOX6P35712 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX6P35712 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX6P35712 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX6P35712 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SOX6P35712 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX6P35712 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX6P35712 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms