Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.63■□□□□ 0.89
CCR1P32246 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.62■□□□□ 0.89
CCR1P32246 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCR1P32246 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 AL121906.2-201ENST00000621597 723 ntBASIC20.62■□□□□ 0.89
CCR1P32246 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.62■□□□□ 0.89
CCR1P32246 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.62■□□□□ 0.89
CCR1P32246 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCR1P32246 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCR1P32246 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR1P32246 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCR1P32246 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR1P32246 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR1P32246 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.61■□□□□ 0.89
CCR1P32246 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR1P32246 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.61■□□□□ 0.89
CCR1P32246 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCR1P32246 AL121829.2-201ENST00000620908 328 ntBASIC20.61■□□□□ 0.89
CCR1P32246 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCR1P32246 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR1P32246 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR1P32246 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.61■□□□□ 0.89
CCR1P32246 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR1P32246 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 PHGDH-210ENST00000641115 1638 ntBASIC20.6■□□□□ 0.89
CCR1P32246 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCR1P32246 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CCR1P32246 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.6■□□□□ 0.89
CCR1P32246 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 AC233263.1-201ENST00000578059 224 ntBASIC20.6■□□□□ 0.89
CCR1P32246 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.6■□□□□ 0.89
CCR1P32246 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
CCR1P32246 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR1P32246 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.6■□□□□ 0.89
CCR1P32246 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCR1P32246 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR1P32246 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCR1P32246 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
CCR1P32246 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCR1P32246 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR1P32246 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR1P32246 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR1P32246 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.59■□□□□ 0.89
CCR1P32246 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR1P32246 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR1P32246 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCR1P32246 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR1P32246 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CCR1P32246 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCR1P32246 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCR1P32246 AL691432.2-201ENST00000607222 2038 ntBASIC20.58■□□□□ 0.89
CCR1P32246 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCR1P32246 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCR1P32246 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCR1P32246 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.58■□□□□ 0.89
CCR1P32246 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.58■□□□□ 0.89
CCR1P32246 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.58■□□□□ 0.89
CCR1P32246 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.58■□□□□ 0.89
CCR1P32246 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.58■□□□□ 0.89
CCR1P32246 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.58■□□□□ 0.89
CCR1P32246 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.58■□□□□ 0.89
CCR1P32246 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.58■□□□□ 0.89
CCR1P32246 MTDHP1-201ENST00000605323 784 ntBASIC20.58■□□□□ 0.89
CCR1P32246 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCR1P32246 TMEM191A-211ENST00000637163 1067 ntBASIC20.58■□□□□ 0.89
CCR1P32246 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCR1P32246 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCR1P32246 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms