Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCD3P28288 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.35■□□□□ 0.53
ABCD3P28288 AC006058.3-201ENST00000606217 1069 ntBASIC18.35■□□□□ 0.53
ABCD3P28288 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.35■□□□□ 0.53
ABCD3P28288 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCD3P28288 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCD3P28288 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCD3P28288 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCD3P28288 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.35■□□□□ 0.53
ABCD3P28288 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ABCD3P28288 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ABCD3P28288 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCD3P28288 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.34■□□□□ 0.53
ABCD3P28288 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCD3P28288 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ABCD3P28288 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ABCD3P28288 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ABCD3P28288 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ABCD3P28288 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ABCD3P28288 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ABCD3P28288 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ABCD3P28288 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.33■□□□□ 0.53
ABCD3P28288 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ABCD3P28288 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ABCD3P28288 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ABCD3P28288 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.33■□□□□ 0.53
ABCD3P28288 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCD3P28288 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ABCD3P28288 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCD3P28288 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.33■□□□□ 0.52
ABCD3P28288 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
ABCD3P28288 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
ABCD3P28288 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ABCD3P28288 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCD3P28288 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCD3P28288 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCD3P28288 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ABCD3P28288 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ABCD3P28288 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ABCD3P28288 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ABCD3P28288 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ABCD3P28288 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCD3P28288 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.32■□□□□ 0.52
ABCD3P28288 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.32■□□□□ 0.52
ABCD3P28288 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ABCD3P28288 AC069544.1-201ENST00000609399 999 ntBASIC18.32■□□□□ 0.52
ABCD3P28288 ITM2C-210ENST00000620962 501 ntBASIC18.32■□□□□ 0.52
ABCD3P28288 AC073648.6-201ENST00000641589 218 ntBASIC18.32■□□□□ 0.52
ABCD3P28288 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCD3P28288 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ABCD3P28288 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCD3P28288 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCD3P28288 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD3P28288 AL691432.2-201ENST00000607222 2038 ntBASIC18.32■□□□□ 0.52
ABCD3P28288 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.32■□□□□ 0.52
ABCD3P28288 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCD3P28288 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCD3P28288 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCD3P28288 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ABCD3P28288 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCD3P28288 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 AC128676.1-201ENST00000454392 318 ntBASIC18.31■□□□□ 0.52
ABCD3P28288 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCD3P28288 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ABCD3P28288 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCD3P28288 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 AC112907.3-201ENST00000577781 2400 ntBASIC18.31■□□□□ 0.52
ABCD3P28288 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD3P28288 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCD3P28288 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms