Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RARRES2P10-201ENST00000564312 460 ntBASIC17.18■□□□□ 0.34
CD40P25942 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 AP001412.1-201ENST00000608405 714 ntBASIC17.18■□□□□ 0.34
CD40P25942 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.17■□□□□ 0.34
CD40P25942 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.17■□□□□ 0.34
CD40P25942 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.17■□□□□ 0.34
CD40P25942 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.17■□□□□ 0.34
CD40P25942 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CD40P25942 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.17■□□□□ 0.34
CD40P25942 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 KRT16P5-201ENST00000455284 522 ntBASIC17.17■□□□□ 0.34
CD40P25942 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.17■□□□□ 0.34
CD40P25942 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.17■□□□□ 0.34
CD40P25942 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 MIR4497-201ENST00000583208 89 ntBASIC17.17■□□□□ 0.34
CD40P25942 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CD40P25942 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.17■□□□□ 0.34
CD40P25942 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.17■□□□□ 0.34
CD40P25942 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD40P25942 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.17■□□□□ 0.34
CD40P25942 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CD40P25942 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD40P25942 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.16■□□□□ 0.34
CD40P25942 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD40P25942 SNORA78-201ENST00000459373 127 ntBASIC17.16■□□□□ 0.34
CD40P25942 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD40P25942 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.16■□□□□ 0.34
CD40P25942 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD40P25942 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD40P25942 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD40P25942 AC004264.1-201ENST00000608354 794 ntBASIC17.16■□□□□ 0.34
CD40P25942 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.16■□□□□ 0.34
CD40P25942 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD40P25942 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD40P25942 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CD40P25942 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CD40P25942 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CD40P25942 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.15■□□□□ 0.34
CD40P25942 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CD40P25942 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CD40P25942 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.15■□□□□ 0.34
CD40P25942 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.15■□□□□ 0.34
CD40P25942 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.15■□□□□ 0.34
CD40P25942 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.15■□□□□ 0.34
CD40P25942 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD40P25942 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.15■□□□□ 0.34
CD40P25942 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CD40P25942 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CD40P25942 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.14■□□□□ 0.33
CD40P25942 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CD40P25942 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CD40P25942 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.14■□□□□ 0.33
CD40P25942 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CD40P25942 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms