Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AL354751.1-201ENST00000412768 1863 ntBASIC16.69■□□□□ 0.26
CXCL3P19876 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.69■□□□□ 0.26
CXCL3P19876 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CXCL3P19876 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCL3P19876 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CXCL3P19876 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCL3P19876 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.69■□□□□ 0.26
CXCL3P19876 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CXCL3P19876 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CXCL3P19876 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CXCL3P19876 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CXCL3P19876 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCL3P19876 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCL3P19876 BICD1-207ENST00000551848 1962 ntBASIC16.69■□□□□ 0.26
CXCL3P19876 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CXCL3P19876 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCL3P19876 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CXCL3P19876 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CXCL3P19876 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCL3P19876 DPP3P2-201ENST00000416030 1696 ntBASIC16.69■□□□□ 0.26
CXCL3P19876 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.69■□□□□ 0.26
CXCL3P19876 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
CXCL3P19876 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCL3P19876 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CXCL3P19876 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.68■□□□□ 0.26
CXCL3P19876 MIR2861-201ENST00000636310 90 ntBASIC16.68■□□□□ 0.26
CXCL3P19876 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.68■□□□□ 0.26
CXCL3P19876 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCL3P19876 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.68■□□□□ 0.26
CXCL3P19876 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.67■□□□□ 0.26
CXCL3P19876 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.67■□□□□ 0.26
CXCL3P19876 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.67■□□□□ 0.26
CXCL3P19876 MTDHP2-201ENST00000601468 714 ntBASIC16.67■□□□□ 0.26
CXCL3P19876 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
CXCL3P19876 AC099398.1-201ENST00000567919 2776 ntBASIC16.67■□□□□ 0.26
CXCL3P19876 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCL3P19876 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CXCL3P19876 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.67■□□□□ 0.26
CXCL3P19876 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CXCL3P19876 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CXCL3P19876 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CXCL3P19876 AC067852.2-201ENST00000590513 2313 ntBASIC16.67■□□□□ 0.26
CXCL3P19876 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL3P19876 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL3P19876 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CXCL3P19876 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL3P19876 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL3P19876 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.66■□□□□ 0.26
CXCL3P19876 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL3P19876 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CXCL3P19876 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CXCL3P19876 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL3P19876 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL3P19876 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL3P19876 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CXCL3P19876 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL3P19876 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL3P19876 WIZP1-201ENST00000531444 2299 ntBASIC16.65■□□□□ 0.26
CXCL3P19876 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL3P19876 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL3P19876 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL3P19876 MIR4787-201ENST00000607364 84 ntBASIC16.65■□□□□ 0.26
CXCL3P19876 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL3P19876 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms