Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.77■■□□□ 1.08
SYN1P17600 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYN1P17600 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.77■■□□□ 1.08
SYN1P17600 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYN1P17600 GPALPP1-207ENST00000611650 899 ntBASIC21.77■■□□□ 1.08
SYN1P17600 AC131212.4-201ENST00000623606 975 ntBASIC21.77■■□□□ 1.08
SYN1P17600 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.77■■□□□ 1.08
SYN1P17600 KRT8P36-201ENST00000489121 1440 ntBASIC21.77■■□□□ 1.08
SYN1P17600 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYN1P17600 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.76■■□□□ 1.07
SYN1P17600 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.76■■□□□ 1.07
SYN1P17600 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 HLA-G-202ENST00000376815 851 ntBASIC21.76■■□□□ 1.07
SYN1P17600 HLA-G-203ENST00000376818 1127 ntBASIC21.76■■□□□ 1.07
SYN1P17600 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 HOMER2P1-201ENST00000455653 964 ntBASIC21.76■■□□□ 1.07
SYN1P17600 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.76■■□□□ 1.07
SYN1P17600 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.76■■□□□ 1.07
SYN1P17600 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.76■■□□□ 1.07
SYN1P17600 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.76■■□□□ 1.07
SYN1P17600 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.76■■□□□ 1.07
SYN1P17600 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.76■■□□□ 1.07
SYN1P17600 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SYN1P17600 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.76■■□□□ 1.07
SYN1P17600 C9orf163-202ENST00000624034 2573 ntBASIC21.76■■□□□ 1.07
SYN1P17600 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.76■■□□□ 1.07
SYN1P17600 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYN1P17600 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYN1P17600 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYN1P17600 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYN1P17600 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYN1P17600 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SYN1P17600 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYN1P17600 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.75■■□□□ 1.07
SYN1P17600 AC007663.1-201ENST00000438948 1240 ntBASIC21.75■■□□□ 1.07
SYN1P17600 MFAP1P1-201ENST00000442257 1255 ntBASIC21.75■■□□□ 1.07
SYN1P17600 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SYN1P17600 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.75■■□□□ 1.07
SYN1P17600 AP000692.2-201ENST00000608391 879 ntBASIC21.75■■□□□ 1.07
SYN1P17600 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.75■■□□□ 1.07
SYN1P17600 AL023973.1-201ENST00000624619 620 ntBASIC21.75■■□□□ 1.07
SYN1P17600 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SYN1P17600 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SYN1P17600 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
SYN1P17600 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SYN1P17600 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.74■■□□□ 1.07
SYN1P17600 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SYN1P17600 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.74■■□□□ 1.07
SYN1P17600 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 TSPY21P-201ENST00000433481 731 ntBASIC21.74■■□□□ 1.07
SYN1P17600 TSPY23P-201ENST00000440136 739 ntBASIC21.74■■□□□ 1.07
SYN1P17600 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.74■■□□□ 1.07
SYN1P17600 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.74■■□□□ 1.07
SYN1P17600 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.74■■□□□ 1.07
SYN1P17600 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
SYN1P17600 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SYN1P17600 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYN1P17600 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYN1P17600 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYN1P17600 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.73■■□□□ 1.07
SYN1P17600 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYN1P17600 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.73■■□□□ 1.07
SYN1P17600 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.73■■□□□ 1.07
SYN1P17600 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SYN1P17600 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYN1P17600 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.73■■□□□ 1.07
SYN1P17600 AC008040.2-201ENST00000461049 708 ntBASIC21.73■■□□□ 1.07
SYN1P17600 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.73■■□□□ 1.07
SYN1P17600 VENTXP5-201ENST00000523979 775 ntBASIC21.73■■□□□ 1.07
SYN1P17600 AL441883.1-201ENST00000566170 1045 ntBASIC21.73■■□□□ 1.07
SYN1P17600 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYN1P17600 AP006587.1-201ENST00000534129 1502 ntBASIC21.73■■□□□ 1.07
SYN1P17600 AC127496.7-201ENST00000625110 1798 ntBASIC21.73■■□□□ 1.07
SYN1P17600 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.73■■□□□ 1.07
SYN1P17600 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYN1P17600 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SYN1P17600 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SYN1P17600 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYN1P17600 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYN1P17600 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.72■■□□□ 1.07
SYN1P17600 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYN1P17600 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYN1P17600 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.72■■□□□ 1.07
SYN1P17600 KRT18P38-201ENST00000449496 1282 ntBASIC21.72■■□□□ 1.07
SYN1P17600 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms