Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC130P13994 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC130P13994 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC130P13994 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC130P13994 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC130P13994 MTDHP1-201ENST00000605323 784 ntBASIC21.09■□□□□ 0.97
CCDC130P13994 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
CCDC130P13994 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC130P13994 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC130P13994 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC130P13994 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC130P13994 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC130P13994 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC130P13994 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC130P13994 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC130P13994 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC130P13994 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC130P13994 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC130P13994 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC130P13994 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC130P13994 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC130P13994 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CCDC130P13994 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CCDC130P13994 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC130P13994 AC112907.3-201ENST00000577781 2400 ntBASIC21.07■□□□□ 0.96
CCDC130P13994 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC130P13994 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC130P13994 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC130P13994 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC130P13994 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CCDC130P13994 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC130P13994 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC130P13994 RN7SL471P-201ENST00000580476 299 ntBASIC21.07■□□□□ 0.96
CCDC130P13994 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC130P13994 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC130P13994 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC130P13994 AC073130.3-201ENST00000624389 2278 ntBASIC21.07■□□□□ 0.96
CCDC130P13994 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC130P13994 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC130P13994 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC130P13994 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 C1QBPP2-201ENST00000528754 825 ntBASIC21.06■□□□□ 0.96
CCDC130P13994 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC130P13994 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC130P13994 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 AL023875.1-201ENST00000640777 796 ntBASIC21.06■□□□□ 0.96
CCDC130P13994 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC130P13994 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC130P13994 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC130P13994 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC130P13994 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC130P13994 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC130P13994 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 AL158047.1-201ENST00000445918 881 ntBASIC21.05■□□□□ 0.96
CCDC130P13994 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC130P13994 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC130P13994 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC130P13994 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms