Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.74■■□□□ 1.07
CHRNA1P02708 LINC00565-201ENST00000562710 2331 ntBASIC21.74■■□□□ 1.07
CHRNA1P02708 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA1P02708 AC116351.2-201ENST00000606540 1585 ntBASIC21.74■■□□□ 1.07
CHRNA1P02708 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA1P02708 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRNA1P02708 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA1P02708 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRNA1P02708 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA1P02708 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.73■■□□□ 1.07
CHRNA1P02708 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA1P02708 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.73■■□□□ 1.07
CHRNA1P02708 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.73■■□□□ 1.07
CHRNA1P02708 FITM1-202ENST00000559294 800 ntBASIC21.73■■□□□ 1.07
CHRNA1P02708 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA1P02708 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.73■■□□□ 1.07
CHRNA1P02708 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRNA1P02708 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.73■■□□□ 1.07
CHRNA1P02708 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHRNA1P02708 TFP1-202ENST00000475455 1573 ntBASIC21.73■■□□□ 1.07
CHRNA1P02708 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA1P02708 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRNA1P02708 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.73■■□□□ 1.07
CHRNA1P02708 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA1P02708 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA1P02708 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA1P02708 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.72■■□□□ 1.07
CHRNA1P02708 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.72■■□□□ 1.07
CHRNA1P02708 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.72■■□□□ 1.07
CHRNA1P02708 C1QL1P1-201ENST00000568105 661 ntBASIC21.72■■□□□ 1.07
CHRNA1P02708 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.72■■□□□ 1.07
CHRNA1P02708 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHRNA1P02708 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA1P02708 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.72■■□□□ 1.07
CHRNA1P02708 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA1P02708 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRNA1P02708 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CHRNA1P02708 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRNA1P02708 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHRNA1P02708 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRNA1P02708 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHRNA1P02708 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.71■■□□□ 1.07
CHRNA1P02708 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRNA1P02708 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.71■■□□□ 1.07
CHRNA1P02708 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRNA1P02708 AC005363.2-201ENST00000618631 242 ntBASIC21.71■■□□□ 1.07
CHRNA1P02708 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHRNA1P02708 AC010947.1-201ENST00000623454 693 ntBASIC21.71■■□□□ 1.07
CHRNA1P02708 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRNA1P02708 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRNA1P02708 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHRNA1P02708 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
CHRNA1P02708 LINC01568-207ENST00000641790 1380 ntBASIC21.71■■□□□ 1.07
CHRNA1P02708 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRNA1P02708 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CHRNA1P02708 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNA1P02708 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNA1P02708 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CHRNA1P02708 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.7■■□□□ 1.06
CHRNA1P02708 MESTP1-201ENST00000404287 994 ntBASIC21.7■■□□□ 1.06
CHRNA1P02708 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.7■■□□□ 1.06
CHRNA1P02708 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNA1P02708 AC092865.7-201ENST00000641832 219 ntBASIC21.7■■□□□ 1.06
CHRNA1P02708 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNA1P02708 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNA1P02708 AC018553.1-201ENST00000616682 1458 ntBASIC21.7■■□□□ 1.06
CHRNA1P02708 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNA1P02708 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNA1P02708 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CHRNA1P02708 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.69■■□□□ 1.06
CHRNA1P02708 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CHRNA1P02708 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 AC005521.1-201ENST00000393351 872 ntBASIC21.69■■□□□ 1.06
CHRNA1P02708 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRNA1P02708 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHRNA1P02708 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRNA1P02708 AL445228.2-201ENST00000605589 952 ntBASIC21.69■■□□□ 1.06
CHRNA1P02708 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.69■■□□□ 1.06
CHRNA1P02708 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CHRNA1P02708 KRT16P6-202ENST00000425692 1426 ntBASIC21.69■■□□□ 1.06
CHRNA1P02708 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHRNA1P02708 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRNA1P02708 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CHRNA1P02708 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CHRNA1P02708 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRNA1P02708 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CHRNA1P02708 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNA1P02708 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRNA1P02708 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CHRNA1P02708 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNA1P02708 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms