Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-2O95096 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NKX2-2O95096 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-2O95096 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.39■□□□□ 0.53
NKX2-2O95096 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-2O95096 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.38■□□□□ 0.53
NKX2-2O95096 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-2O95096 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.38■□□□□ 0.53
NKX2-2O95096 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NKX2-2O95096 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-2O95096 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.38■□□□□ 0.53
NKX2-2O95096 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.38■□□□□ 0.53
NKX2-2O95096 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.38■□□□□ 0.53
NKX2-2O95096 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.38■□□□□ 0.53
NKX2-2O95096 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NKX2-2O95096 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NKX2-2O95096 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NKX2-2O95096 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-2O95096 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-2O95096 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-2O95096 AC125437.2-201ENST00000625180 2167 ntBASIC18.38■□□□□ 0.53
NKX2-2O95096 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-2O95096 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.38■□□□□ 0.53
NKX2-2O95096 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.38■□□□□ 0.53
NKX2-2O95096 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-2O95096 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NKX2-2O95096 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NKX2-2O95096 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NKX2-2O95096 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.37■□□□□ 0.53
NKX2-2O95096 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.37■□□□□ 0.53
NKX2-2O95096 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.37■□□□□ 0.53
NKX2-2O95096 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.37■□□□□ 0.53
NKX2-2O95096 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX2-2O95096 AC006557.6-201ENST00000623071 864 ntBASIC18.37■□□□□ 0.53
NKX2-2O95096 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX2-2O95096 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NKX2-2O95096 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.37■□□□□ 0.53
NKX2-2O95096 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NKX2-2O95096 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX2-2O95096 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX2-2O95096 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.37■□□□□ 0.53
NKX2-2O95096 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NKX2-2O95096 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NKX2-2O95096 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.36■□□□□ 0.53
NKX2-2O95096 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.36■□□□□ 0.53
NKX2-2O95096 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.36■□□□□ 0.53
NKX2-2O95096 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
NKX2-2O95096 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NKX2-2O95096 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.35■□□□□ 0.53
NKX2-2O95096 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.35■□□□□ 0.53
NKX2-2O95096 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.35■□□□□ 0.53
NKX2-2O95096 AC116351.2-201ENST00000606540 1585 ntBASIC18.35■□□□□ 0.53
NKX2-2O95096 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.35■□□□□ 0.53
NKX2-2O95096 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.35■□□□□ 0.53
NKX2-2O95096 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.35■□□□□ 0.53
NKX2-2O95096 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.35■□□□□ 0.53
NKX2-2O95096 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX2-2O95096 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX2-2O95096 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms