Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT3O75175 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CNOT3O75175 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CNOT3O75175 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT3O75175 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CNOT3O75175 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT3O75175 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CNOT3O75175 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.22■□□□□ 0.67
CNOT3O75175 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.22■□□□□ 0.67
CNOT3O75175 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.22■□□□□ 0.67
CNOT3O75175 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.22■□□□□ 0.67
CNOT3O75175 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT3O75175 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.22■□□□□ 0.67
CNOT3O75175 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.22■□□□□ 0.67
CNOT3O75175 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.22■□□□□ 0.67
CNOT3O75175 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CNOT3O75175 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT3O75175 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT3O75175 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CNOT3O75175 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT3O75175 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CNOT3O75175 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT3O75175 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT3O75175 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CNOT3O75175 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT3O75175 AC073648.6-201ENST00000641589 218 ntBASIC19.21■□□□□ 0.67
CNOT3O75175 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT3O75175 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT3O75175 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CNOT3O75175 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CNOT3O75175 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 AC092368.3-202ENST00000574180 1591 ntBASIC19.2■□□□□ 0.66
CNOT3O75175 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT3O75175 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT3O75175 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT3O75175 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CNOT3O75175 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.2■□□□□ 0.66
CNOT3O75175 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CNOT3O75175 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT3O75175 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT3O75175 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.2■□□□□ 0.66
CNOT3O75175 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT3O75175 C2orf69P4-201ENST00000565394 541 ntBASIC19.2■□□□□ 0.66
CNOT3O75175 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT3O75175 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT3O75175 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CNOT3O75175 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT3O75175 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNOT3O75175 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNOT3O75175 GCSHP5-201ENST00000443090 522 ntBASIC19.19■□□□□ 0.66
CNOT3O75175 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.19■□□□□ 0.66
CNOT3O75175 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.19■□□□□ 0.66
CNOT3O75175 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNOT3O75175 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.19■□□□□ 0.66
CNOT3O75175 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CNOT3O75175 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT3O75175 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CNOT3O75175 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms