Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA12O60330 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA12O60330 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA12O60330 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA12O60330 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 AC092667.1-201ENST00000434301 2586 ntBASIC19.73■□□□□ 0.75
PCDHGA12O60330 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA12O60330 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA12O60330 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA12O60330 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA12O60330 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA12O60330 HTR7P1-201ENST00000538670 1336 ntBASIC19.73■□□□□ 0.75
PCDHGA12O60330 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA12O60330 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 LINC01521-201ENST00000504184 1943 ntBASIC19.72■□□□□ 0.75
PCDHGA12O60330 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 MMP23A-201ENST00000234610 1017 ntBASIC19.72■□□□□ 0.75
PCDHGA12O60330 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.72■□□□□ 0.75
PCDHGA12O60330 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA12O60330 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHGA12O60330 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA12O60330 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA12O60330 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 NBPF21P-201ENST00000425093 1451 ntBASIC19.7■□□□□ 0.74
PCDHGA12O60330 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA12O60330 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA12O60330 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA12O60330 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms