Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.13■□□□□ 0.33
PHF1O43189 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.13■□□□□ 0.33
PHF1O43189 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PHF1O43189 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.13■□□□□ 0.33
PHF1O43189 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 AC211429.1-201ENST00000415277 523 ntBASIC17.13■□□□□ 0.33
PHF1O43189 AL355472.2-201ENST00000422958 438 ntBASIC17.13■□□□□ 0.33
PHF1O43189 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.13■□□□□ 0.33
PHF1O43189 AP003097.1-201ENST00000530657 1135 ntBASIC17.13■□□□□ 0.33
PHF1O43189 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.13■□□□□ 0.33
PHF1O43189 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.13■□□□□ 0.33
PHF1O43189 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PHF1O43189 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PHF1O43189 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.13■□□□□ 0.33
PHF1O43189 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PHF1O43189 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PHF1O43189 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PHF1O43189 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
PHF1O43189 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PHF1O43189 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PHF1O43189 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.12■□□□□ 0.33
PHF1O43189 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.12■□□□□ 0.33
PHF1O43189 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.12■□□□□ 0.33
PHF1O43189 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.12■□□□□ 0.33
PHF1O43189 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.12■□□□□ 0.33
PHF1O43189 MIR4497-201ENST00000583208 89 ntBASIC17.12■□□□□ 0.33
PHF1O43189 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.12■□□□□ 0.33
PHF1O43189 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.12■□□□□ 0.33
PHF1O43189 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.12■□□□□ 0.33
PHF1O43189 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHF1O43189 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHF1O43189 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 AC112907.3-201ENST00000577781 2400 ntBASIC17.11■□□□□ 0.33
PHF1O43189 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHF1O43189 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PHF1O43189 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.11■□□□□ 0.33
PHF1O43189 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHF1O43189 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.11■□□□□ 0.33
PHF1O43189 UNC93B5-201ENST00000530315 699 ntBASIC17.11■□□□□ 0.33
PHF1O43189 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.11■□□□□ 0.33
PHF1O43189 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.11■□□□□ 0.33
PHF1O43189 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.11■□□□□ 0.33
PHF1O43189 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.11■□□□□ 0.33
PHF1O43189 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 AL359736.2-201ENST00000621992 437 ntBASIC17.11■□□□□ 0.33
PHF1O43189 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.11■□□□□ 0.33
PHF1O43189 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHF1O43189 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHF1O43189 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PHF1O43189 AC116050.2-201ENST00000612102 1779 ntBASIC17.1■□□□□ 0.33
PHF1O43189 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 FP700111.2-201ENST00000619190 1892 ntBASIC17.1■□□□□ 0.33
PHF1O43189 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 LSM12P1-201ENST00000411836 588 ntBASIC17.1■□□□□ 0.33
PHF1O43189 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 KRT18P21-201ENST00000515767 1272 ntBASIC17.1■□□□□ 0.33
PHF1O43189 LINC01023-201ENST00000606054 436 ntBASIC17.1■□□□□ 0.33
PHF1O43189 REXO1L12P-201ENST00000622156 912 ntBASIC17.1■□□□□ 0.33
PHF1O43189 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHF1O43189 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PHF1O43189 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms