Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.35■□□□□ 0.69
HDAC3O15379 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.35■□□□□ 0.69
HDAC3O15379 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.35■□□□□ 0.69
HDAC3O15379 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HDAC3O15379 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.35■□□□□ 0.69
HDAC3O15379 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HDAC3O15379 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HDAC3O15379 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 AC093503.3-201ENST00000624917 2352 ntBASIC19.35■□□□□ 0.69
HDAC3O15379 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC3O15379 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.35■□□□□ 0.69
HDAC3O15379 AL032819.2-201ENST00000624543 2162 ntBASIC19.34■□□□□ 0.69
HDAC3O15379 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HDAC3O15379 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HDAC3O15379 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HDAC3O15379 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.34■□□□□ 0.69
HDAC3O15379 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.34■□□□□ 0.69
HDAC3O15379 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.34■□□□□ 0.69
HDAC3O15379 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HDAC3O15379 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 CYP21A1P-202ENST00000354927 1481 ntBASIC19.34■□□□□ 0.69
HDAC3O15379 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC3O15379 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HDAC3O15379 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.33■□□□□ 0.69
HDAC3O15379 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.33■□□□□ 0.69
HDAC3O15379 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC3O15379 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
HDAC3O15379 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC3O15379 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.33■□□□□ 0.68
HDAC3O15379 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.33■□□□□ 0.68
HDAC3O15379 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.33■□□□□ 0.68
HDAC3O15379 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HDAC3O15379 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC3O15379 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC3O15379 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.33■□□□□ 0.68
HDAC3O15379 KRT8P17-201ENST00000453110 1448 ntBASIC19.33■□□□□ 0.68
HDAC3O15379 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC3O15379 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC3O15379 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HDAC3O15379 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.32■□□□□ 0.68
HDAC3O15379 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC3O15379 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC3O15379 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HDAC3O15379 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HDAC3O15379 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDAC3O15379 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC3O15379 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.32■□□□□ 0.68
HDAC3O15379 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
HDAC3O15379 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HDAC3O15379 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HDAC3O15379 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC3O15379 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC3O15379 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms