Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 AL691432.2-201ENST00000607222 2038 ntBASIC14.14□□□□□ -0.15
LINC01549A6NIU2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 SLC47A1P1-202ENST00000449666 945 ntBASIC14.13□□□□□ -0.15
LINC01549A6NIU2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 AC009237.14-201ENST00000609975 1594 ntBASIC14.13□□□□□ -0.15
LINC01549A6NIU2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01549A6NIU2 AC005332.8-201ENST00000622750 2735 ntBASIC14.13□□□□□ -0.15
LINC01549A6NIU2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01549A6NIU2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 DPP3P2-201ENST00000416030 1696 ntBASIC14.11□□□□□ -0.15
LINC01549A6NIU2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 AC239859.2-201ENST00000444165 318 ntBASIC14.11□□□□□ -0.15
LINC01549A6NIU2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.11□□□□□ -0.15
LINC01549A6NIU2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01549A6NIU2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01549A6NIU2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms