Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM235A6NFC5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 IRS3P-201ENST00000223076 1006 ntBASIC16.96■□□□□ 0.31
TMEM235A6NFC5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 AP001160.3-201ENST00000601484 763 ntBASIC16.96■□□□□ 0.31
TMEM235A6NFC5 AC131212.1-201ENST00000613771 668 ntBASIC16.96■□□□□ 0.31
TMEM235A6NFC5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM235A6NFC5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.96■□□□□ 0.3
TMEM235A6NFC5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM235A6NFC5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 AC105265.2-201ENST00000467189 838 ntBASIC16.95■□□□□ 0.3
TMEM235A6NFC5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.95■□□□□ 0.3
TMEM235A6NFC5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TMEM235A6NFC5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 CCDC92B-201ENST00000575506 885 ntBASIC16.94■□□□□ 0.3
TMEM235A6NFC5 AC243732.1-201ENST00000612648 864 ntBASIC16.94■□□□□ 0.3
TMEM235A6NFC5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 RBM17P2-201ENST00000616397 1405 ntBASIC16.94■□□□□ 0.3
TMEM235A6NFC5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TMEM235A6NFC5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 AC008406.3-201ENST00000620001 1374 ntBASIC16.93■□□□□ 0.3
TMEM235A6NFC5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 AL031432.3-201ENST00000607698 485 ntBASIC16.93■□□□□ 0.3
TMEM235A6NFC5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 NEFHP1-201ENST00000412845 2629 ntBASIC16.93■□□□□ 0.3
TMEM235A6NFC5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TMEM235A6NFC5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms