Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC008687.6-201ENST00000596318 630 ntBASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC006058.3-201ENST00000606217 1069 ntBASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CYP21A1P-202ENST00000354927 1481 ntBASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 UNC93B5-201ENST00000530315 699 ntBASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC026366.1-201ENST00000488803 879 ntBASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC060766.5-201ENST00000590539 871 ntBASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TCRBV4S1A1TA0A5B7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TCF3P1-201ENST00000423021 1937 ntBASIC15.96■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PRORSD1P-201ENST00000295112 541 ntBASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PGM5P4-201ENST00000421970 445 ntBASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AP003097.1-201ENST00000530657 1135 ntBASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 HLA-B-256ENST00000639848 1089 ntBASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms