Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AL356652.1-201ENST00000615962 565 ntBASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AL136967.2-201ENST00000623968 743 ntBASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AC138932.1-201ENST00000534164 6830 ntBASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 AC087633.2-202ENST00000565166 1439 ntBASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 AP001271.2-201ENST00000624018 1556 ntBASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 AC120498.9-201ENST00000339021 3867 ntBASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 AL138781.2-201ENST00000617896 1843 ntBASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV27A0A0K0K1C4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV27A0A0K0K1C4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV27A0A0K0K1C4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms