Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
HTTP42858 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 ASTN1-202ENST00000361833 7116 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 AC011592.1-201ENST00000624647 3634 ntBASIC7.01□□□□□ -1.29
HTTP42858 TMPRSS4-218ENST00000534111 5550 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
HTTP42858 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 RNU1-49P-201ENST00000363468 159 ntBASIC7.01□□□□□ -1.29
HTTP42858 RPL23AP27-201ENST00000415161 451 ntBASIC7.01□□□□□ -1.29
HTTP42858 AL590762.4-201ENST00000425885 253 ntBASIC7.01□□□□□ -1.29
HTTP42858 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 AC012075.1-201ENST00000436549 580 ntBASIC7.01□□□□□ -1.29
HTTP42858 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC7.01□□□□□ -1.29
HTTP42858 SNORA70.20-201ENST00000516848 126 ntBASIC7.01□□□□□ -1.29
HTTP42858 AC122713.1-201ENST00000518368 1015 ntBASIC7.01□□□□□ -1.29
HTTP42858 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 AL691477.1-201ENST00000624398 162 ntBASIC7.01□□□□□ -1.29
HTTP42858 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
HTTP42858 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HTTP42858 AC024587.1-201ENST00000505925 2157 ntBASIC7□□□□□ -1.29
HTTP42858 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 AC125238.2-201ENST00000430003 1440 ntBASIC7□□□□□ -1.29
HTTP42858 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
HTTP42858 RNA5SP183-201ENST00000362452 119 ntBASIC7□□□□□ -1.29
HTTP42858 AL590762.1-201ENST00000391782 432 ntBASIC7□□□□□ -1.29
HTTP42858 HMGB1P20-201ENST00000402555 677 ntBASIC7□□□□□ -1.29
HTTP42858 AL596448.1-201ENST00000415024 392 ntBASIC7□□□□□ -1.29
HTTP42858 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7□□□□□ -1.29
HTTP42858 Z80107.2-201ENST00000445127 392 ntBASIC7□□□□□ -1.29
HTTP42858 AL356801.1-201ENST00000559320 294 ntBASIC7□□□□□ -1.29
HTTP42858 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7□□□□□ -1.29
HTTP42858 AC022106.1-201ENST00000612834 766 ntBASIC7□□□□□ -1.29
HTTP42858 IL24-207ENST00000611909 1621 ntTSL 3 BASIC7□□□□□ -1.29
HTTP42858 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 MARK2P4-201ENST00000503381 2380 ntBASIC7□□□□□ -1.29
HTTP42858 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 AC123769.1-201ENST00000530992 3192 ntBASIC7□□□□□ -1.29
HTTP42858 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7□□□□□ -1.29
HTTP42858 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HTTP42858 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC7□□□□□ -1.29
HTTP42858 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 CUBNP3-201ENST00000457461 1784 ntBASIC7□□□□□ -1.29
HTTP42858 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7□□□□□ -1.29
HTTP42858 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 RPL37P18-201ENST00000411602 243 ntBASIC7□□□□□ -1.29
HTTP42858 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7□□□□□ -1.29
HTTP42858 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7□□□□□ -1.29
HTTP42858 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7□□□□□ -1.29
HTTP42858 AL671862.1-201ENST00000515851 349 ntBASIC7□□□□□ -1.29
HTTP42858 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7□□□□□ -1.29
HTTP42858 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7□□□□□ -1.29
HTTP42858 AC091768.1-201ENST00000609258 930 ntBASIC7□□□□□ -1.29
HTTP42858 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 MRE11P1-201ENST00000464884 2127 ntBASIC7□□□□□ -1.29
HTTP42858 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HTTP42858 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
HTTP42858 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
HTTP42858 VDAC1P2-201ENST00000423609 850 ntBASIC6.99□□□□□ -1.29
HTTP42858 VDAC1P6-201ENST00000430062 855 ntBASIC6.99□□□□□ -1.29
HTTP42858 RN7SL269P-201ENST00000467795 305 ntBASIC6.99□□□□□ -1.29
HTTP42858 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.99□□□□□ -1.29
HTTP42858 SETP21-201ENST00000514799 892 ntBASIC6.99□□□□□ -1.29
HTTP42858 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC6.99□□□□□ -1.29
HTTP42858 AC012557.1-201ENST00000607115 611 ntBASIC6.99□□□□□ -1.29
HTTP42858 MROH3P-201ENST00000435735 2676 ntBASIC6.99□□□□□ -1.29
HTTP42858 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HTTP42858 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.99□□□□□ -1.29
HTTP42858 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HTTP42858 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.99□□□□□ -1.29
HTTP42858 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC6.99□□□□□ -1.29
HTTP42858 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC6.99□□□□□ -1.29
HTTP42858 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
HTTP42858 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC6.99□□□□□ -1.29
HTTP42858 AL355032.1-201ENST00000472981 438 ntBASIC6.99□□□□□ -1.29
HTTP42858 AC091078.2-201ENST00000557145 559 ntBASIC6.99□□□□□ -1.29
HTTP42858 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms