RNA–Protein interactions for RNA: ENST00000534111.5

TMPRSS4-218, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMPRSS4, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-218ENST00000534111 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
TMPRSS4-218ENST00000534111 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
TMPRSS4-218ENST00000534111 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
TMPRSS4-218ENST00000534111 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
TMPRSS4-218ENST00000534111 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
TMPRSS4-218ENST00000534111 ABCC9O60706 1549 aa16.92■□□□□ 0.3
TMPRSS4-218ENST00000534111 APLP2Q06481 763 aa16.79■□□□□ 0.28
TMPRSS4-218ENST00000534111 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
TMPRSS4-218ENST00000534111 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
TMPRSS4-218ENST00000534111 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
TMPRSS4-218ENST00000534111 ATP1B4Q9UN42 357 aaPredicted RBP16.34■□□□□ 0.21
TMPRSS4-218ENST00000534111 RANGAP1P46060 587 aaPredicted RBP16.29■□□□□ 0.2
TMPRSS4-218ENST00000534111 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
TMPRSS4-218ENST00000534111 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
TMPRSS4-218ENST00000534111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
TMPRSS4-218ENST00000534111 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
TMPRSS4-218ENST00000534111 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
TMPRSS4-218ENST00000534111 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
TMPRSS4-218ENST00000534111 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
TMPRSS4-218ENST00000534111 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
TMPRSS4-218ENST00000534111 FBLN2P98095 1184 aa15.86■□□□□ 0.13
TMPRSS4-218ENST00000534111 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
TMPRSS4-218ENST00000534111 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.13
TMPRSS4-218ENST00000534111 NACADO15069 1562 aa15.82■□□□□ 0.12
TMPRSS4-218ENST00000534111 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.08
TMPRSS4-218ENST00000534111 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
TMPRSS4-218ENST00000534111 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
TMPRSS4-218ENST00000534111 CCER1Q8TC90 406 aaPredicted RBP15.51■□□□□ 0.07
TMPRSS4-218ENST00000534111 ITGAEP38570 1179 aa15.46■□□□□ 0.07
TMPRSS4-218ENST00000534111 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
TMPRSS4-218ENST00000534111 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
TMPRSS4-218ENST00000534111 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
TMPRSS4-218ENST00000534111 CHMP7Q8WUX9 453 aaPredicted RBP15.39■□□□□ 0.05
TMPRSS4-218ENST00000534111 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
TMPRSS4-218ENST00000534111 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
TMPRSS4-218ENST00000534111 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
TMPRSS4-218ENST00000534111 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
TMPRSS4-218ENST00000534111 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
TMPRSS4-218ENST00000534111 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
TMPRSS4-218ENST00000534111 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
TMPRSS4-218ENST00000534111 P3H3Q8IVL6 736 aa15.24■□□□□ 0.03
TMPRSS4-218ENST00000534111 TRIM52Q96A61 297 aa15.22■□□□□ 0.03
TMPRSS4-218ENST00000534111 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
TMPRSS4-218ENST00000534111 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
TMPRSS4-218ENST00000534111 ARID3CA6NKF2 412 aa15.18■□□□□ 0.02
TMPRSS4-218ENST00000534111 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
TMPRSS4-218ENST00000534111 BCANQ96GW7 911 aa15.14■□□□□ 0.01
TMPRSS4-218ENST00000534111 ZNF777Q9ULD5 760 aaPredicted RBP15.14■□□□□ 0.01
TMPRSS4-218ENST00000534111 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
TMPRSS4-218ENST00000534111 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
TMPRSS4-218ENST00000534111 PDS5BQ9NTI5 1447 aa15.11■□□□□ 0.01
TMPRSS4-218ENST00000534111 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
TMPRSS4-218ENST00000534111 SMARCA2P51531 1590 aa15.08■□□□□ 0
TMPRSS4-218ENST00000534111 ERICH6Q7L0X2 663 aa15.07■□□□□ 0
TMPRSS4-218ENST00000534111 CECR2Q9BXF3 1484 aa15.05■□□□□ 0
TMPRSS4-218ENST00000534111 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
TMPRSS4-218ENST00000534111 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
TMPRSS4-218ENST00000534111 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
TMPRSS4-218ENST00000534111 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
TMPRSS4-218ENST00000534111 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
TMPRSS4-218ENST00000534111 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
TMPRSS4-218ENST00000534111 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
TMPRSS4-218ENST00000534111 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
TMPRSS4-218ENST00000534111 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
TMPRSS4-218ENST00000534111 EEA1Q15075 1411 aa14.93□□□□□ -0.02
TMPRSS4-218ENST00000534111 KCNH8Q96L42 1107 aa14.89□□□□□ -0.03
TMPRSS4-218ENST00000534111 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
TMPRSS4-218ENST00000534111 NEFLP07196 543 aa14.86□□□□□ -0.03
TMPRSS4-218ENST00000534111 ZNF326Q5BKZ1 582 aaKnown RBP14.86□□□□□ -0.03
TMPRSS4-218ENST00000534111 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
TMPRSS4-218ENST00000534111 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
TMPRSS4-218ENST00000534111 ARID4BQ4LE39 1312 aaPredicted RBP14.83□□□□□ -0.04
TMPRSS4-218ENST00000534111 NEUROD1Q13562 356 aa14.81□□□□□ -0.04
TMPRSS4-218ENST00000534111 ACIN1Q9UKV3 1341 aaKnown RBP14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 CARMIL2Q6F5E8 1435 aa14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 CUX2O14529 1486 aa14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 CNGB1Q14028 1251 aaPredicted RBP14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 SOGA1O94964 1423 aa14.74□□□□□ -0.05
TMPRSS4-218ENST00000534111 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
TMPRSS4-218ENST00000534111 NEFMP07197 916 aa14.73□□□□□ -0.05
TMPRSS4-218ENST00000534111 CLIP1P30622 1438 aa14.72□□□□□ -0.05
TMPRSS4-218ENST00000534111 GOLGA3Q08378 1498 aa14.71□□□□□ -0.05
TMPRSS4-218ENST00000534111 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
TMPRSS4-218ENST00000534111 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
TMPRSS4-218ENST00000534111 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
TMPRSS4-218ENST00000534111 PPP1R15AO75807 674 aaPredicted RBP14.67□□□□□ -0.06
TMPRSS4-218ENST00000534111 CCDC88BA6NC98 1476 aa14.67□□□□□ -0.06
TMPRSS4-218ENST00000534111 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
TMPRSS4-218ENST00000534111 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
TMPRSS4-218ENST00000534111 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
TMPRSS4-218ENST00000534111 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
TMPRSS4-218ENST00000534111 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
TMPRSS4-218ENST00000534111 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
TMPRSS4-218ENST00000534111 C14orf37Q86TY3 774 aa14.58□□□□□ -0.07
TMPRSS4-218ENST00000534111 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
TMPRSS4-218ENST00000534111 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
TMPRSS4-218ENST00000534111 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms