Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
COL4A5P29400 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
COL4A5P29400 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
COL4A5P29400 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.81□□□□□ -1.16
COL4A5P29400 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL4A5P29400 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.81□□□□□ -1.16
COL4A5P29400 AC107398.3-201ENST00000562284 7000 ntBASIC7.81□□□□□ -1.16
COL4A5P29400 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 THADA-202ENST00000402360 2974 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.8□□□□□ -1.16
COL4A5P29400 AL353807.3-201ENST00000500626 2505 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC7.8□□□□□ -1.16
COL4A5P29400 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
COL4A5P29400 OR52B3P-201ENST00000314715 928 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 SOCS5P1-201ENST00000440415 949 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 AC023141.9-201ENST00000458734 412 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.8□□□□□ -1.16
COL4A5P29400 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.8□□□□□ -1.16
COL4A5P29400 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.8□□□□□ -1.16
COL4A5P29400 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.8□□□□□ -1.16
COL4A5P29400 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.8□□□□□ -1.16
COL4A5P29400 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.8□□□□□ -1.16
COL4A5P29400 TPRX1P1-201ENST00000557620 319 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 AC026951.2-201ENST00000613847 241 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 AL357153.4-201ENST00000620487 1016 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 AC020763.5-201ENST00000623298 430 ntBASIC7.8□□□□□ -1.16
COL4A5P29400 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL4A5P29400 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.8□□□□□ -1.16
COL4A5P29400 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
COL4A5P29400 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC7.8□□□□□ -1.16
COL4A5P29400 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 RNU1-150P-201ENST00000362491 162 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
COL4A5P29400 RPS7P14-201ENST00000426405 583 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 RNA5SP362-201ENST00000516048 118 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 IGHV4-55-201ENST00000520889 368 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 MIR4489-201ENST00000578869 62 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 RNA5SP440-201ENST00000612665 119 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.79□□□□□ -1.16
COL4A5P29400 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
COL4A5P29400 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
COL4A5P29400 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.79□□□□□ -1.16
COL4A5P29400 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
COL4A5P29400 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
COL4A5P29400 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 RN7SKP121-201ENST00000410842 305 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 AL354890.1-201ENST00000413730 346 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.79□□□□□ -1.16
COL4A5P29400 PSMC1P2-201ENST00000423961 1204 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 RN7SL643P-201ENST00000471845 291 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 AC098847.1-201ENST00000473094 348 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms