Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RB1P06400 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.28□□□□□ -1.24
RB1P06400 AL355974.1-201ENST00000618896 1708 ntBASIC7.28□□□□□ -1.24
RB1P06400 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.28□□□□□ -1.24
RB1P06400 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.28□□□□□ -1.24
RB1P06400 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 AL773545.3-201ENST00000414297 706 ntBASIC7.28□□□□□ -1.24
RB1P06400 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.28□□□□□ -1.24
RB1P06400 RPL23AP28-201ENST00000448062 470 ntBASIC7.28□□□□□ -1.24
RB1P06400 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.28□□□□□ -1.24
RB1P06400 AL583856.1-201ENST00000454078 1101 ntBASIC7.28□□□□□ -1.24
RB1P06400 MEF2AP1-201ENST00000454867 863 ntBASIC7.28□□□□□ -1.24
RB1P06400 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.28□□□□□ -1.24
RB1P06400 PSMA6P2-201ENST00000457574 686 ntBASIC7.28□□□□□ -1.24
RB1P06400 H3F3AP5-201ENST00000475267 429 ntBASIC7.28□□□□□ -1.24
RB1P06400 AP002884.1-201ENST00000479691 655 ntBASIC7.28□□□□□ -1.24
RB1P06400 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.28□□□□□ -1.24
RB1P06400 AC093870.1-201ENST00000506837 213 ntBASIC7.28□□□□□ -1.24
RB1P06400 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.28□□□□□ -1.24
RB1P06400 AC093664.1-201ENST00000511779 289 ntBASIC7.28□□□□□ -1.24
RB1P06400 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.28□□□□□ -1.24
RB1P06400 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.28□□□□□ -1.24
RB1P06400 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.28□□□□□ -1.24
RB1P06400 AC002310.3-201ENST00000569728 723 ntBASIC7.28□□□□□ -1.24
RB1P06400 AP001542.1-201ENST00000591314 200 ntBASIC7.28□□□□□ -1.24
RB1P06400 SMIM12P1-201ENST00000603004 274 ntBASIC7.28□□□□□ -1.24
RB1P06400 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.28□□□□□ -1.24
RB1P06400 AP001962.1-201ENST00000624114 559 ntBASIC7.28□□□□□ -1.24
RB1P06400 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.28□□□□□ -1.24
RB1P06400 CASC19-212ENST00000641153 1287 ntBASIC7.28□□□□□ -1.24
RB1P06400 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
RB1P06400 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.28□□□□□ -1.24
RB1P06400 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.27□□□□□ -1.24
RB1P06400 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
RB1P06400 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.27□□□□□ -1.25
RB1P06400 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.27□□□□□ -1.25
RB1P06400 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.27□□□□□ -1.25
RB1P06400 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RB1P06400 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.27□□□□□ -1.25
RB1P06400 RN7SKP240-201ENST00000410583 375 ntBASIC7.27□□□□□ -1.25
RB1P06400 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.27□□□□□ -1.25
RB1P06400 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.27□□□□□ -1.25
RB1P06400 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.27□□□□□ -1.25
RB1P06400 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RB1P06400 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.27□□□□□ -1.25
RB1P06400 RN7SL552P-201ENST00000462094 276 ntBASIC7.27□□□□□ -1.25
RB1P06400 RN7SL221P-201ENST00000466190 281 ntBASIC7.27□□□□□ -1.25
RB1P06400 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RB1P06400 AC091849.1-201ENST00000509920 121 ntBASIC7.27□□□□□ -1.25
RB1P06400 AL390198.2-201ENST00000510553 222 ntBASIC7.27□□□□□ -1.25
RB1P06400 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.27□□□□□ -1.25
RB1P06400 EIF4EP5-201ENST00000528228 640 ntBASIC7.27□□□□□ -1.25
RB1P06400 AP004609.2-201ENST00000532177 190 ntBASIC7.27□□□□□ -1.25
RB1P06400 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.27□□□□□ -1.25
RB1P06400 ULK4P2-202ENST00000564187 492 ntBASIC7.27□□□□□ -1.25
RB1P06400 AL078601.3-201ENST00000573303 535 ntBASIC7.27□□□□□ -1.25
RB1P06400 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.27□□□□□ -1.25
RB1P06400 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.27□□□□□ -1.25
RB1P06400 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.27□□□□□ -1.25
RB1P06400 RN7SL261P-201ENST00000613441 282 ntBASIC7.27□□□□□ -1.25
RB1P06400 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 AC008555.1-201ENST00000561778 2757 ntBASIC7.27□□□□□ -1.25
RB1P06400 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
RB1P06400 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.27□□□□□ -1.25
RB1P06400 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RB1P06400 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.27□□□□□ -1.25
RB1P06400 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.26□□□□□ -1.25
RB1P06400 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.26□□□□□ -1.25
RB1P06400 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 SMG1P5-202ENST00000529428 4219 ntBASIC7.26□□□□□ -1.25
RB1P06400 SMG1P2-201ENST00000566127 4221 ntBASIC7.26□□□□□ -1.25
RB1P06400 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RB1P06400 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 350.6 ms