Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC026956.1-201ENST00000558741 396 ntBASIC7.05□□□□□ -1.28
CLDN5O00501 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.05□□□□□ -1.28
CLDN5O00501 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.05□□□□□ -1.28
CLDN5O00501 MIR6823-201ENST00000622118 61 ntBASIC7.05□□□□□ -1.28
CLDN5O00501 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.05□□□□□ -1.28
CLDN5O00501 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.05□□□□□ -1.28
CLDN5O00501 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.05□□□□□ -1.28
CLDN5O00501 MAPK10-365ENST00000641902 3825 ntBASIC7.05□□□□□ -1.28
CLDN5O00501 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.05□□□□□ -1.28
CLDN5O00501 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
CLDN5O00501 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
CLDN5O00501 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CLDN5O00501 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
CLDN5O00501 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.05□□□□□ -1.28
CLDN5O00501 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.04□□□□□ -1.28
CLDN5O00501 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.04□□□□□ -1.28
CLDN5O00501 VN2R1P-201ENST00000449668 1743 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 HSPD1P4-201ENST00000547203 1702 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 NEK2P4-201ENST00000425793 1329 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AL512310.3-201ENST00000547023 1335 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.04□□□□□ -1.28
CLDN5O00501 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.04□□□□□ -1.28
CLDN5O00501 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.04□□□□□ -1.28
CLDN5O00501 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 RN7SKP296-201ENST00000411185 341 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.04□□□□□ -1.28
CLDN5O00501 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.04□□□□□ -1.28
CLDN5O00501 Z82198.3-201ENST00000421145 199 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.04□□□□□ -1.28
CLDN5O00501 AC245452.2-201ENST00000435222 392 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AC013403.1-201ENST00000436954 263 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 NPM1P23-201ENST00000440193 849 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.04□□□□□ -1.28
CLDN5O00501 GAPDHP37-201ENST00000442317 968 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.04□□□□□ -1.28
CLDN5O00501 RN7SL836P-201ENST00000476140 296 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CLDN5O00501 RN7SL561P-201ENST00000488553 281 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.04□□□□□ -1.28
CLDN5O00501 AC138517.1-201ENST00000515724 568 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.04□□□□□ -1.28
CLDN5O00501 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.04□□□□□ -1.28
CLDN5O00501 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CLDN5O00501 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.04□□□□□ -1.28
CLDN5O00501 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.04□□□□□ -1.28
CLDN5O00501 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 BMS1P16-201ENST00000556075 1147 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.04□□□□□ -1.28
CLDN5O00501 RN7SL199P-201ENST00000578752 281 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 RN7SL656P-201ENST00000579044 281 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 RN7SL404P-201ENST00000582421 281 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AC012175.1-201ENST00000603755 531 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 GAPDHP41-201ENST00000613707 975 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AC068213.1-201ENST00000625124 226 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.04□□□□□ -1.28
CLDN5O00501 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CLDN5O00501 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 CTAGE11P-201ENST00000451540 2353 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 MAPK10-383ENST00000642032 3390 ntBASIC7.04□□□□□ -1.28
CLDN5O00501 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CLDN5O00501 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CLDN5O00501 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 AL596244.1-201ENST00000567068 3779 ntBASIC7.03□□□□□ -1.28
CLDN5O00501 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.03□□□□□ -1.28
CLDN5O00501 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 CDY3P-201ENST00000454543 1618 ntBASIC7.03□□□□□ -1.28
CLDN5O00501 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.03□□□□□ -1.28
CLDN5O00501 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CLDN5O00501 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CLDN5O00501 MIR191-201ENST00000384873 92 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms