Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 RPL4P3-201ENST00000428881 1311 ntBASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CUEDC1Q9NWM3 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC119674.1-202ENST00000641333 1860 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 FAM205BP-202ENST00000399773 4009 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 RNU6-157P-201ENST00000383957 107 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 Y_RNA.578-201ENST00000390903 88 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 HNRNPCP2-201ENST00000399515 881 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 ANXA2P3-201ENST00000404883 1008 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 RNU2-66P-201ENST00000410650 161 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 USP9YP6-201ENST00000413550 854 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 TATDN1P1-201ENST00000414123 891 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 USP9YP18-201ENST00000425912 695 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AL357632.1-201ENST00000426688 643 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC010975.2-201ENST00000427781 588 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 MORF4L1P5-201ENST00000433352 961 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 IFNWP5-201ENST00000445100 588 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CASP3P1-201ENST00000446037 609 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC069213.3-201ENST00000454858 474 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 RN7SL757P-201ENST00000466709 301 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC021006.1-201ENST00000489849 553 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 ABCA11P-202ENST00000504019 2110 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC106872.4-201ENST00000510050 523 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 RN7SKP244-201ENST00000516513 307 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 RPS20-204ENST00000519606 424 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 HMGB1P46-201ENST00000520062 610 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC068790.1-201ENST00000536166 355 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC078886.1-201ENST00000549144 554 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC011611.5-201ENST00000552477 578 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AL442663.2-201ENST00000554385 511 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AL138976.2-201ENST00000563989 694 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 MIR5008-201ENST00000584300 94 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LINC00674-202ENST00000590734 160 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CD209-211ENST00000602261 939 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC090970.3-201ENST00000612566 866 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AC104260.1-201ENST00000616660 539 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CASC19-274ENST00000642018 970 ntBASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 SLC14A1-202ENST00000402943 1390 ntTSL 2 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms