RNA–Protein interactions for RNA: ENST00000516513.1

RN7SKP244-201, Transcript of RNA, 7SK small nuclear pseudogene 244, humanhuman

BASIC

Gene RN7SKP244, Length 307 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP244-201ENST00000516513 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
RN7SKP244-201ENST00000516513 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
RN7SKP244-201ENST00000516513 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
RN7SKP244-201ENST00000516513 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
RN7SKP244-201ENST00000516513 FOXD1Q16676 465 aa19.09■□□□□ 0.65
RN7SKP244-201ENST00000516513 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
RN7SKP244-201ENST00000516513 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
RN7SKP244-201ENST00000516513 ADRA2BP18089 450 aa18.03■□□□□ 0.48
RN7SKP244-201ENST00000516513 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
RN7SKP244-201ENST00000516513 MSH5O43196 834 aa17.73■□□□□ 0.43
RN7SKP244-201ENST00000516513 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
RN7SKP244-201ENST00000516513 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
RN7SKP244-201ENST00000516513 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
RN7SKP244-201ENST00000516513 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
RN7SKP244-201ENST00000516513 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
RN7SKP244-201ENST00000516513 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
RN7SKP244-201ENST00000516513 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
RN7SKP244-201ENST00000516513 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
RN7SKP244-201ENST00000516513 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
RN7SKP244-201ENST00000516513 DCAF8L1A6NGE4 600 aa15.65■□□□□ 0.1
RN7SKP244-201ENST00000516513 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
RN7SKP244-201ENST00000516513 KCNA4P22459 653 aa15.52■□□□□ 0.08
RN7SKP244-201ENST00000516513 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
RN7SKP244-201ENST00000516513 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
RN7SKP244-201ENST00000516513 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
RN7SKP244-201ENST00000516513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 0
RN7SKP244-201ENST00000516513 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
RN7SKP244-201ENST00000516513 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
RN7SKP244-201ENST00000516513 U3KPZ7 1027 aaPredicted RBP14.78□□□□□ -0.04
RN7SKP244-201ENST00000516513 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
RN7SKP244-201ENST00000516513 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
RN7SKP244-201ENST00000516513 CAPN15O75808 1086 aa14.46□□□□□ -0.09
RN7SKP244-201ENST00000516513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
RN7SKP244-201ENST00000516513 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
RN7SKP244-201ENST00000516513 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
RN7SKP244-201ENST00000516513 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
RN7SKP244-201ENST00000516513 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
RN7SKP244-201ENST00000516513 APLP2Q06481 763 aa14.34□□□□□ -0.11
RN7SKP244-201ENST00000516513 DSG3P32926 999 aa14.3□□□□□ -0.12
RN7SKP244-201ENST00000516513 ZBTB22O15209 634 aa14.29□□□□□ -0.12
RN7SKP244-201ENST00000516513 TRHP20396 242 aaPredicted RBP14.29□□□□□ -0.12
RN7SKP244-201ENST00000516513 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
RN7SKP244-201ENST00000516513 ABCB7O75027 752 aa14.17□□□□□ -0.14
RN7SKP244-201ENST00000516513 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
RN7SKP244-201ENST00000516513 POLA2Q14181 598 aa13.96□□□□□ -0.17
RN7SKP244-201ENST00000516513 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
RN7SKP244-201ENST00000516513 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
RN7SKP244-201ENST00000516513 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
RN7SKP244-201ENST00000516513 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
RN7SKP244-201ENST00000516513 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
RN7SKP244-201ENST00000516513 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
RN7SKP244-201ENST00000516513 FBLN2P98095 1184 aa13.45□□□□□ -0.26
RN7SKP244-201ENST00000516513 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
RN7SKP244-201ENST00000516513 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
RN7SKP244-201ENST00000516513 POTEHQ6S545 545 aa13.29□□□□□ -0.28
RN7SKP244-201ENST00000516513 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.29
RN7SKP244-201ENST00000516513 SPDYE6P0CI01 402 aa13.27□□□□□ -0.29
RN7SKP244-201ENST00000516513 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.29
RN7SKP244-201ENST00000516513 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
RN7SKP244-201ENST00000516513 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
RN7SKP244-201ENST00000516513 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP244-201ENST00000516513 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
RN7SKP244-201ENST00000516513 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
RN7SKP244-201ENST00000516513 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
RN7SKP244-201ENST00000516513 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
RN7SKP244-201ENST00000516513 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP244-201ENST00000516513 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
RN7SKP244-201ENST00000516513 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
RN7SKP244-201ENST00000516513 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
RN7SKP244-201ENST00000516513 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
RN7SKP244-201ENST00000516513 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
RN7SKP244-201ENST00000516513 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
RN7SKP244-201ENST00000516513 HAX1O00165 279 aa12.67□□□□□ -0.38
RN7SKP244-201ENST00000516513 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
RN7SKP244-201ENST00000516513 PROM2Q8N271 834 aa12.62□□□□□ -0.39
RN7SKP244-201ENST00000516513 SP7Q8TDD2 431 aaPredicted RBP12.58□□□□□ -0.4
RN7SKP244-201ENST00000516513 EVX2Q03828 476 aa12.56□□□□□ -0.4
RN7SKP244-201ENST00000516513 FKBP8Q14318 412 aa12.54□□□□□ -0.4
RN7SKP244-201ENST00000516513 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
RN7SKP244-201ENST00000516513 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
RN7SKP244-201ENST00000516513 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
RN7SKP244-201ENST00000516513 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
RN7SKP244-201ENST00000516513 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
RN7SKP244-201ENST00000516513 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
RN7SKP244-201ENST00000516513 MIER1Q8N108 512 aa12.28□□□□□ -0.44
RN7SKP244-201ENST00000516513 GABBR2O75899 941 aa12.27□□□□□ -0.45
RN7SKP244-201ENST00000516513 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
RN7SKP244-201ENST00000516513 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
RN7SKP244-201ENST00000516513 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
RN7SKP244-201ENST00000516513 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
RN7SKP244-201ENST00000516513 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP244-201ENST00000516513 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
RN7SKP244-201ENST00000516513 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
RN7SKP244-201ENST00000516513 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP244-201ENST00000516513 CLCN6P51797 869 aa12.09□□□□□ -0.47
RN7SKP244-201ENST00000516513 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
RN7SKP244-201ENST00000516513 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
RN7SKP244-201ENST00000516513 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
RN7SKP244-201ENST00000516513 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
RN7SKP244-201ENST00000516513 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms