RNA–Protein interactions for RNA: ENST00000616660.1

AC104260.1-201, humanhuman

BASIC

Gene AC104260.1, Length 539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104260.1-201ENST00000616660 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
AC104260.1-201ENST00000616660 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
AC104260.1-201ENST00000616660 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
AC104260.1-201ENST00000616660 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
AC104260.1-201ENST00000616660 FOXD1Q16676 465 aa19.86■□□□□ 0.77
AC104260.1-201ENST00000616660 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
AC104260.1-201ENST00000616660 MSH5O43196 834 aa18.61■□□□□ 0.57
AC104260.1-201ENST00000616660 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
AC104260.1-201ENST00000616660 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
AC104260.1-201ENST00000616660 ADRA2BP18089 450 aa18.5■□□□□ 0.55
AC104260.1-201ENST00000616660 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
AC104260.1-201ENST00000616660 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
AC104260.1-201ENST00000616660 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
AC104260.1-201ENST00000616660 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
AC104260.1-201ENST00000616660 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
AC104260.1-201ENST00000616660 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
AC104260.1-201ENST00000616660 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
AC104260.1-201ENST00000616660 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
AC104260.1-201ENST00000616660 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
AC104260.1-201ENST00000616660 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
AC104260.1-201ENST00000616660 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
AC104260.1-201ENST00000616660 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
AC104260.1-201ENST00000616660 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
AC104260.1-201ENST00000616660 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
AC104260.1-201ENST00000616660 C1QBPQ07021 282 aaKnown RBP15.66■□□□□ 0.1
AC104260.1-201ENST00000616660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
AC104260.1-201ENST00000616660 KCNA4P22459 653 aa15.37■□□□□ 0.05
AC104260.1-201ENST00000616660 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
AC104260.1-201ENST00000616660 SLC4A2P04920 1241 aa15□□□□□ -0.01
AC104260.1-201ENST00000616660 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
AC104260.1-201ENST00000616660 CAPN15O75808 1086 aa14.94□□□□□ -0.02
AC104260.1-201ENST00000616660 DSG3P32926 999 aa14.86□□□□□ -0.03
AC104260.1-201ENST00000616660 APLP2Q06481 763 aa14.76□□□□□ -0.05
AC104260.1-201ENST00000616660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
AC104260.1-201ENST00000616660 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
AC104260.1-201ENST00000616660 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
AC104260.1-201ENST00000616660 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
AC104260.1-201ENST00000616660 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
AC104260.1-201ENST00000616660 ABCB7O75027 752 aa14.57□□□□□ -0.08
AC104260.1-201ENST00000616660 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
AC104260.1-201ENST00000616660 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
AC104260.1-201ENST00000616660 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
AC104260.1-201ENST00000616660 POLA2Q14181 598 aa14.3□□□□□ -0.12
AC104260.1-201ENST00000616660 POTEHQ6S545 545 aa14.26□□□□□ -0.13
AC104260.1-201ENST00000616660 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
AC104260.1-201ENST00000616660 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
AC104260.1-201ENST00000616660 ZBTB22O15209 634 aa14.11□□□□□ -0.15
AC104260.1-201ENST00000616660 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
AC104260.1-201ENST00000616660 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
AC104260.1-201ENST00000616660 CHRDL2Q6WN34 429 aa13.87□□□□□ -0.19
AC104260.1-201ENST00000616660 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
AC104260.1-201ENST00000616660 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
AC104260.1-201ENST00000616660 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
AC104260.1-201ENST00000616660 FBLN2P98095 1184 aa13.66□□□□□ -0.22
AC104260.1-201ENST00000616660 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
AC104260.1-201ENST00000616660 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
AC104260.1-201ENST00000616660 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
AC104260.1-201ENST00000616660 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
AC104260.1-201ENST00000616660 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
AC104260.1-201ENST00000616660 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
AC104260.1-201ENST00000616660 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
AC104260.1-201ENST00000616660 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
AC104260.1-201ENST00000616660 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
AC104260.1-201ENST00000616660 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
AC104260.1-201ENST00000616660 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
AC104260.1-201ENST00000616660 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
AC104260.1-201ENST00000616660 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
AC104260.1-201ENST00000616660 HAX1O00165 279 aa13.32□□□□□ -0.28
AC104260.1-201ENST00000616660 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
AC104260.1-201ENST00000616660 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
AC104260.1-201ENST00000616660 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
AC104260.1-201ENST00000616660 EVX2Q03828 476 aa13.13□□□□□ -0.31
AC104260.1-201ENST00000616660 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
AC104260.1-201ENST00000616660 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
AC104260.1-201ENST00000616660 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
AC104260.1-201ENST00000616660 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
AC104260.1-201ENST00000616660 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
AC104260.1-201ENST00000616660 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
AC104260.1-201ENST00000616660 GABBR2O75899 941 aa12.84□□□□□ -0.35
AC104260.1-201ENST00000616660 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
AC104260.1-201ENST00000616660 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
AC104260.1-201ENST00000616660 CLCN6P51797 869 aa12.68□□□□□ -0.38
AC104260.1-201ENST00000616660 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
AC104260.1-201ENST00000616660 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
AC104260.1-201ENST00000616660 POTEIP0CG38 1075 aa12.56□□□□□ -0.4
AC104260.1-201ENST00000616660 PROM2Q8N271 834 aa12.56□□□□□ -0.4
AC104260.1-201ENST00000616660 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
AC104260.1-201ENST00000616660 LHX8Q68G74 356 aa12.54□□□□□ -0.4
AC104260.1-201ENST00000616660 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
AC104260.1-201ENST00000616660 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
AC104260.1-201ENST00000616660 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
AC104260.1-201ENST00000616660 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
AC104260.1-201ENST00000616660 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
AC104260.1-201ENST00000616660 MIER1Q8N108 512 aa12.33□□□□□ -0.44
AC104260.1-201ENST00000616660 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
AC104260.1-201ENST00000616660 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
AC104260.1-201ENST00000616660 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
AC104260.1-201ENST00000616660 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
AC104260.1-201ENST00000616660 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
AC104260.1-201ENST00000616660 FKBP8Q14318 412 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms