Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC5.99□□□□□ -1.45
SSX3Q99909 RN7SL689P-201ENST00000577215 297 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC006116.6-201ENST00000593258 1103 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AL589765.5-201ENST00000596133 515 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC099777.1-201ENST00000603779 1070 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AL353807.4-201ENST00000604995 257 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC080112.3-201ENST00000612552 880 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AL357153.4-201ENST00000620487 1016 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC012254.5-201ENST00000623573 478 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 FKBP1AP4-201ENST00000631775 336 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC233280.20-201ENST00000637412 416 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.99□□□□□ -1.45
SSX3Q99909 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 AC079949.2-201ENST00000617117 2933 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX3Q99909 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 AC079248.1-201ENST00000427568 1546 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SSX3Q99909 AC090643.1-201ENST00000623600 3100 ntBASIC5.99□□□□□ -1.45
SSX3Q99909 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX3Q99909 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX3Q99909 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX3Q99909 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX3Q99909 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 ICE2P1-201ENST00000512800 1849 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 AC069222.1-201ENST00000608028 3360 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SSX3Q99909 RPL10P16-201ENST00000325000 645 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 RNA5SP238-201ENST00000365464 120 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 TYMSP1-201ENST00000407851 869 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SSX3Q99909 AL390840.1-201ENST00000420303 988 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 FDPSP6-201ENST00000425091 512 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 AC005040.1-201ENST00000437783 482 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX3Q99909 AC239800.1-201ENST00000442049 719 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 AC114928.1-201ENST00000446516 415 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 AC092570.2-201ENST00000452117 1143 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX3Q99909 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX3Q99909 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX3Q99909 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 ATP5J2P4-201ENST00000538774 267 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 EGLN3P1-201ENST00000541727 720 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
SSX3Q99909 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX3Q99909 AL365223.1-201ENST00000574864 1297 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 RBM4-213ENST00000578778 582 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX3Q99909 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 RN7SL42P-201ENST00000579786 294 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 AC023206.1-201ENST00000605824 298 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 RN7SL778P-201ENST00000607160 297 ntBASIC5.98□□□□□ -1.45
SSX3Q99909 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX3Q99909 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX3Q99909 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC5.98□□□□□ -1.45
SSX3Q99909 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms