Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCNB1IP1Q9NPC3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCNB1IP1Q9NPC3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CCNB1IP1Q9NPC3 AL157713.1-201ENST00000379752 1531 ntBASIC6.4□□□□□ -1.39
CCNB1IP1Q9NPC3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.4□□□□□ -1.39
CCNB1IP1Q9NPC3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 OR11H13P-201ENST00000359695 979 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 RNA5SP396-201ENST00000364834 120 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 RNA5SP172-201ENST00000365061 118 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 RNA5SP427-201ENST00000365323 119 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC096537.2-201ENST00000413707 714 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC017104.2-201ENST00000417000 321 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 RN7SL182P-201ENST00000496499 300 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC011352.2-201ENST00000514574 1016 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 ATP5J2P4-201ENST00000538774 267 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 AC073488.7-201ENST00000633785 778 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 OR5AU1-204ENST00000641822 1197 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 SNX18P3-202ENST00000565670 1750 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 OR5M2P-202ENST00000641241 4242 ntBASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNB1IP1Q9NPC3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AL451142.1-201ENST00000375867 775 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 RPL9P21-201ENST00000392269 505 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 OR7E117P-201ENST00000422682 1112 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 RBMY2JP-201ENST00000425544 1059 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 OR7E163P-201ENST00000505943 894 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 RN7SKP248-201ENST00000516278 305 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AC018523.1-201ENST00000534211 512 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 EGLN3P1-201ENST00000541727 720 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AL049829.3-202ENST00000604278 711 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AC008385.1-201ENST00000604421 355 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AC091768.1-201ENST00000609258 930 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCNB1IP1Q9NPC3 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms