RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
LINC01043-201ENST00000565936 NISCHQ9Y2I1 1504 aa11.47□□□□□ -0.57
LINC01043-201ENST00000565936 SUPT5HO00267 1087 aaKnown RBP10.75□□□□□ -0.69
LINC01043-201ENST00000565936 SHROOM4Q9ULL8 1493 aa10.65□□□□□ -0.71
LINC01043-201ENST00000565936 FAM9AQ8IZU1 332 aaPredicted RBP10.58□□□□□ -0.72
LINC01043-201ENST00000565936 APLP2Q06481 763 aa10.39□□□□□ -0.75
LINC01043-201ENST00000565936 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
LINC01043-201ENST00000565936 TRIM41Q8WV44 630 aa10.1□□□□□ -0.79
LINC01043-201ENST00000565936 ATP1B4Q9UN42 357 aaPredicted RBP10.02□□□□□ -0.81
LINC01043-201ENST00000565936 ABCC9O60706 1549 aa10□□□□□ -0.81
LINC01043-201ENST00000565936 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
LINC01043-201ENST00000565936 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
LINC01043-201ENST00000565936 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
LINC01043-201ENST00000565936 TTBK1Q5TCY1 1321 aaPredicted RBP9.85□□□□□ -0.83
LINC01043-201ENST00000565936 PABPN1Q86U42 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINC01043-201ENST00000565936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.79□□□□□ -0.84
LINC01043-201ENST00000565936 HNRNPUL2Q1KMD3 747 aaKnown RBP9.79□□□□□ -0.84
LINC01043-201ENST00000565936 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
LINC01043-201ENST00000565936 ZEB1P37275 1124 aaPredicted RBP9.76□□□□□ -0.85
LINC01043-201ENST00000565936 PCGF6Q9BYE7 350 aa9.73□□□□□ -0.85
LINC01043-201ENST00000565936 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
LINC01043-201ENST00000565936 CCDC180Q9P1Z9 1646 aa9.66□□□□□ -0.86
LINC01043-201ENST00000565936 FBLN2P98095 1184 aa9.54□□□□□ -0.88
LINC01043-201ENST00000565936 RB1CC1Q8TDY2 1594 aa9.53□□□□□ -0.88
LINC01043-201ENST00000565936 SCRIBQ14160 1630 aa9.52□□□□□ -0.88
LINC01043-201ENST00000565936 CENPBP07199 599 aaPredicted RBP9.52□□□□□ -0.89
LINC01043-201ENST00000565936 ITGAEP38570 1179 aa9.51□□□□□ -0.89
LINC01043-201ENST00000565936 CHIC1Q5VXU3 224 aa9.5□□□□□ -0.89
LINC01043-201ENST00000565936 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
LINC01043-201ENST00000565936 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
LINC01043-201ENST00000565936 PPARGC1BQ86YN6 1023 aaKnown RBP9.45□□□□□ -0.9
LINC01043-201ENST00000565936 NEFLP07196 543 aa9.43□□□□□ -0.9
LINC01043-201ENST00000565936 ERICH6Q7L0X2 663 aa9.43□□□□□ -0.9
LINC01043-201ENST00000565936 NACADO15069 1562 aa9.41□□□□□ -0.9
LINC01043-201ENST00000565936 FAM50AQ14320 339 aaKnown RBP9.41□□□□□ -0.9
LINC01043-201ENST00000565936 CDK11AQ9UQ88 783 aaPredicted RBP9.4□□□□□ -0.9
LINC01043-201ENST00000565936 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.91
LINC01043-201ENST00000565936 POLR3GLQ9BT43 218 aa9.39□□□□□ -0.91
LINC01043-201ENST00000565936 LOC105371045A0A1W2PR82 267 aa9.37□□□□□ -0.91
LINC01043-201ENST00000565936 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
LINC01043-201ENST00000565936 SLC4A1APQ9BWU0 796 aaKnown RBP9.36□□□□□ -0.91
LINC01043-201ENST00000565936 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
LINC01043-201ENST00000565936 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
LINC01043-201ENST00000565936 BCANQ96GW7 911 aa9.25□□□□□ -0.93
LINC01043-201ENST00000565936 CHMP7Q8WUX9 453 aaPredicted RBP9.25□□□□□ -0.93
LINC01043-201ENST00000565936 P3H3Q8IVL6 736 aa9.24□□□□□ -0.93
LINC01043-201ENST00000565936 ZNF777Q9ULD5 760 aaPredicted RBP9.21□□□□□ -0.93
LINC01043-201ENST00000565936 BAZ1BQ9UIG0 1483 aaKnown RBP9.2□□□□□ -0.94
LINC01043-201ENST00000565936 YTHDC1Q96MU7 727 aaKnown RBP9.2□□□□□ -0.94
LINC01043-201ENST00000565936 ERCC6Q03468 1493 aa9.19□□□□□ -0.94
LINC01043-201ENST00000565936 ARID3CA6NKF2 412 aa9.18□□□□□ -0.94
LINC01043-201ENST00000565936 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
LINC01043-201ENST00000565936 DCAF1Q9Y4B6 1507 aa9.16□□□□□ -0.94
LINC01043-201ENST00000565936 NEUROD1Q13562 356 aa9.16□□□□□ -0.94
LINC01043-201ENST00000565936 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
LINC01043-201ENST00000565936 NEFMP07197 916 aa9.15□□□□□ -0.94
LINC01043-201ENST00000565936 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.95
LINC01043-201ENST00000565936 CNGB1Q14028 1251 aaPredicted RBP9.14□□□□□ -0.95
LINC01043-201ENST00000565936 HRCP23327 699 aa9.12□□□□□ -0.95
LINC01043-201ENST00000565936 BAZ1AQ9NRL2 1556 aaPredicted RBP9.11□□□□□ -0.95
LINC01043-201ENST00000565936 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
LINC01043-201ENST00000565936 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
LINC01043-201ENST00000565936 EEA1Q15075 1411 aa9.09□□□□□ -0.95
LINC01043-201ENST00000565936 MYT1Q01538 1121 aa9.09□□□□□ -0.95
LINC01043-201ENST00000565936 ACIN1Q9UKV3 1341 aaKnown RBP9.09□□□□□ -0.95
LINC01043-201ENST00000565936 CHGAP10645 457 aaKnown RBP9.07□□□□□ -0.96
LINC01043-201ENST00000565936 MTUS2Q5JR59 1369 aa9.06□□□□□ -0.96
LINC01043-201ENST00000565936 ZBTB47Q9UFB7 747 aaPredicted RBP9.06□□□□□ -0.96
LINC01043-201ENST00000565936 RSF1Q96T23 1441 aaPredicted RBP9.05□□□□□ -0.96
LINC01043-201ENST00000565936 PLEKHD1A6NEE1 506 aa9.05□□□□□ -0.96
LINC01043-201ENST00000565936 ANP32CO43423 234 aa9.05□□□□□ -0.96
LINC01043-201ENST00000565936 KIF27Q86VH2 1401 aa9.04□□□□□ -0.96
LINC01043-201ENST00000565936 WRNQ14191 1432 aaPredicted RBP eCLIP9.03□□□□□ -0.96
LINC01043-201ENST00000565936 PLPPR3Q6T4P5 718 aa9.03□□□□□ -0.96
LINC01043-201ENST00000565936 CLSPNQ9HAW4 1339 aa9.02□□□□□ -0.97
LINC01043-201ENST00000565936 SMARCA2P51531 1590 aa9.02□□□□□ -0.97
LINC01043-201ENST00000565936 SLC24A1O60721 1099 aa9.02□□□□□ -0.97
LINC01043-201ENST00000565936 PDS5BQ9NTI5 1447 aa9.01□□□□□ -0.97
LINC01043-201ENST00000565936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC01043-201ENST00000565936 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
LINC01043-201ENST00000565936 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
LINC01043-201ENST00000565936 KCNH8Q96L42 1107 aa8.98□□□□□ -0.97
LINC01043-201ENST00000565936 MYO15BQ96JP2 1530 aa8.98□□□□□ -0.97
LINC01043-201ENST00000565936 GOLGA3Q08378 1498 aa8.98□□□□□ -0.97
LINC01043-201ENST00000565936 CLIP1P30622 1438 aa8.97□□□□□ -0.97
LINC01043-201ENST00000565936 ARID4BQ4LE39 1312 aaPredicted RBP8.95□□□□□ -0.98
LINC01043-201ENST00000565936 CANXP27824 592 aaKnown RBP8.95□□□□□ -0.98
LINC01043-201ENST00000565936 PPP1R15AO75807 674 aaPredicted RBP8.94□□□□□ -0.98
LINC01043-201ENST00000565936 CHIC2Q9UKJ5 165 aa8.93□□□□□ -0.98
LINC01043-201ENST00000565936 CEP164Q9UPV0 1460 aa8.92□□□□□ -0.98
LINC01043-201ENST00000565936 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
LINC01043-201ENST00000565936 CFDP1Q9UEE9 299 aaPredicted RBP8.9□□□□□ -0.98
LINC01043-201ENST00000565936 TRHP20396 242 aaPredicted RBP8.9□□□□□ -0.98
LINC01043-201ENST00000565936 CARMIL2Q6F5E8 1435 aa8.89□□□□□ -0.99
LINC01043-201ENST00000565936 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
LINC01043-201ENST00000565936 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
LINC01043-201ENST00000565936 FHAD1B1AJZ9 1412 aa8.87□□□□□ -0.99
LINC01043-201ENST00000565936 CUX2O14529 1486 aa8.86□□□□□ -0.99
LINC01043-201ENST00000565936 CARMIL1Q5VZK9 1371 aa8.86□□□□□ -0.99
LINC01043-201ENST00000565936 HDGFP51858 240 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms