Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL136981.1-203ENST00000451452 3844 ntBASIC7.28□□□□□ -1.24
LHX1P48742 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.28□□□□□ -1.24
LHX1P48742 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
LHX1P48742 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
LHX1P48742 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
LHX1P48742 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
LHX1P48742 AC020658.2-201ENST00000559030 4020 ntBASIC7.27□□□□□ -1.25
LHX1P48742 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.27□□□□□ -1.25
LHX1P48742 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.27□□□□□ -1.25
LHX1P48742 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LHX1P48742 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
LHX1P48742 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 UBBP1-201ENST00000392399 473 ntBASIC7.27□□□□□ -1.25
LHX1P48742 CYCSP17-201ENST00000407870 315 ntBASIC7.27□□□□□ -1.25
LHX1P48742 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.27□□□□□ -1.25
LHX1P48742 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 GAPDHP20-201ENST00000444107 1007 ntBASIC7.27□□□□□ -1.25
LHX1P48742 CEACAMP11-201ENST00000455211 583 ntBASIC7.27□□□□□ -1.25
LHX1P48742 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.27□□□□□ -1.25
LHX1P48742 RPS7P11-201ENST00000484240 586 ntBASIC7.27□□□□□ -1.25
LHX1P48742 AC009567.2-201ENST00000502989 349 ntBASIC7.27□□□□□ -1.25
LHX1P48742 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LHX1P48742 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC7.27□□□□□ -1.25
LHX1P48742 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.27□□□□□ -1.25
LHX1P48742 RPL7AP69-201ENST00000595306 806 ntBASIC7.27□□□□□ -1.25
LHX1P48742 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.27□□□□□ -1.25
LHX1P48742 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.27□□□□□ -1.25
LHX1P48742 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 ZNF806-201ENST00000438300 1774 ntBASIC7.27□□□□□ -1.25
LHX1P48742 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
LHX1P48742 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.27□□□□□ -1.25
LHX1P48742 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
LHX1P48742 AL096816.1-201ENST00000623300 2920 ntBASIC7.27□□□□□ -1.25
LHX1P48742 AC079248.1-201ENST00000427568 1546 ntBASIC7.27□□□□□ -1.25
LHX1P48742 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LHX1P48742 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 RPL12P13-201ENST00000310055 497 ntBASIC7.26□□□□□ -1.25
LHX1P48742 MIR551B-201ENST00000384984 96 ntBASIC7.26□□□□□ -1.25
LHX1P48742 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
LHX1P48742 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
LHX1P48742 MIR1266-201ENST00000408125 84 ntBASIC7.26□□□□□ -1.25
LHX1P48742 RN7SKP205-201ENST00000410999 307 ntBASIC7.26□□□□□ -1.25
LHX1P48742 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.26□□□□□ -1.25
LHX1P48742 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 RPL23AP28-201ENST00000448062 470 ntBASIC7.26□□□□□ -1.25
LHX1P48742 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.26□□□□□ -1.25
LHX1P48742 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.26□□□□□ -1.25
LHX1P48742 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.26□□□□□ -1.25
LHX1P48742 MRPS5P3-201ENST00000515577 166 ntBASIC7.26□□□□□ -1.25
LHX1P48742 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.26□□□□□ -1.25
LHX1P48742 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.26□□□□□ -1.25
LHX1P48742 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
LHX1P48742 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
LHX1P48742 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
LHX1P48742 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.25□□□□□ -1.25
LHX1P48742 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
LHX1P48742 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LHX1P48742 AC019178.1-201ENST00000392337 440 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms