Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HMGA1P8-201ENST00000414130 321 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.34□□□□□ -1.55
IFNA1P01562 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC5.34□□□□□ -1.55
IFNA1P01562 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC5.34□□□□□ -1.55
IFNA1P01562 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.34□□□□□ -1.55
IFNA1P01562 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC5.34□□□□□ -1.55
IFNA1P01562 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.34□□□□□ -1.55
IFNA1P01562 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC5.34□□□□□ -1.55
IFNA1P01562 GAPDHP28-201ENST00000455134 1003 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 SULT1D1P-201ENST00000458020 882 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 SNORA81.1-201ENST00000458922 177 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 RPL34P34-201ENST00000465389 354 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 RN7SL89P-201ENST00000480252 283 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 RN7SL236P-201ENST00000484759 284 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 RN7SL28P-201ENST00000488836 298 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
IFNA1P01562 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.34□□□□□ -1.55
IFNA1P01562 IGKV2-19-201ENST00000518132 283 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.34□□□□□ -1.55
IFNA1P01562 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC5.34□□□□□ -1.55
IFNA1P01562 IGHV3-57-201ENST00000520143 280 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC5.34□□□□□ -1.55
IFNA1P01562 ILF2P2-201ENST00000547482 1117 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC5.34□□□□□ -1.55
IFNA1P01562 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
IFNA1P01562 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
IFNA1P01562 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.34□□□□□ -1.55
IFNA1P01562 AC074051.4-201ENST00000564888 892 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 EEF1B2P1-201ENST00000567221 672 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 KARS-209ENST00000568378 459 ntTSL 5 BASIC5.34□□□□□ -1.55
IFNA1P01562 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.34□□□□□ -1.55
IFNA1P01562 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC5.34□□□□□ -1.55
IFNA1P01562 DTNA-220ENST00000590831 847 ntTSL 2 BASIC5.34□□□□□ -1.55
IFNA1P01562 RPSAP66-201ENST00000592196 606 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.34□□□□□ -1.55
IFNA1P01562 TTR-205ENST00000613781 556 ntTSL 5 BASIC5.34□□□□□ -1.55
IFNA1P01562 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
IFNA1P01562 AC025287.2-201ENST00000621911 668 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 Z99916.3-201ENST00000623422 1080 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 AP000550.3-201ENST00000637734 379 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
IFNA1P01562 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
IFNA1P01562 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
IFNA1P01562 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
IFNA1P01562 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.34□□□□□ -1.55
IFNA1P01562 AC005261.2-201ENST00000593427 4258 ntBASIC5.34□□□□□ -1.55
IFNA1P01562 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.34□□□□□ -1.55
IFNA1P01562 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
IFNA1P01562 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.56
IFNA1P01562 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
IFNA1P01562 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC5.34□□□□□ -1.56
IFNA1P01562 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.34□□□□□ -1.56
IFNA1P01562 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
IFNA1P01562 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
IFNA1P01562 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
IFNA1P01562 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.33□□□□□ -1.56
IFNA1P01562 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC108463.3-201ENST00000603748 1482 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.33□□□□□ -1.56
IFNA1P01562 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 RN7SKP47-201ENST00000365347 328 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 CENPW-202ENST00000368326 443 ntTSL 2 BASIC5.33□□□□□ -1.56
IFNA1P01562 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFNA1P01562 U3.34-201ENST00000408198 212 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC5.33□□□□□ -1.56
IFNA1P01562 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 GAPDHP55-201ENST00000423136 803 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC016734.1-201ENST00000436998 654 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 AL604028.2-201ENST00000437848 788 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC080079.1-201ENST00000509326 1045 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.33□□□□□ -1.56
IFNA1P01562 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC5.33□□□□□ -1.56
IFNA1P01562 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC5.33□□□□□ -1.56
IFNA1P01562 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.33□□□□□ -1.56
IFNA1P01562 RPS7P1-201ENST00000571702 585 ntBASIC5.33□□□□□ -1.56
IFNA1P01562 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.33□□□□□ -1.56
IFNA1P01562 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.33□□□□□ -1.56
IFNA1P01562 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms