RNA–Protein interactions for RNA: ENST00000518704.1

AP003438.1-201, humanhuman

TSL 3 BASIC

Gene AP003438.1, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003438.1-201ENST00000518704 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
AP003438.1-201ENST00000518704 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
AP003438.1-201ENST00000518704 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
AP003438.1-201ENST00000518704 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
AP003438.1-201ENST00000518704 FOXD1Q16676 465 aa16.59■□□□□ 0.25
AP003438.1-201ENST00000518704 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
AP003438.1-201ENST00000518704 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
AP003438.1-201ENST00000518704 ADRA2BP18089 450 aa15.64■□□□□ 0.09
AP003438.1-201ENST00000518704 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
AP003438.1-201ENST00000518704 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
AP003438.1-201ENST00000518704 MSH5O43196 834 aa15.44■□□□□ 0.06
AP003438.1-201ENST00000518704 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
AP003438.1-201ENST00000518704 ABCC9O60706 1549 aa14.36□□□□□ -0.11
AP003438.1-201ENST00000518704 SCAF1Q9H7N4 1312 aaKnown RBP14.33□□□□□ -0.12
AP003438.1-201ENST00000518704 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
AP003438.1-201ENST00000518704 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
AP003438.1-201ENST00000518704 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
AP003438.1-201ENST00000518704 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
AP003438.1-201ENST00000518704 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
AP003438.1-201ENST00000518704 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
AP003438.1-201ENST00000518704 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
AP003438.1-201ENST00000518704 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
AP003438.1-201ENST00000518704 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
AP003438.1-201ENST00000518704 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
AP003438.1-201ENST00000518704 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
AP003438.1-201ENST00000518704 KCNA4P22459 653 aa13.49□□□□□ -0.25
AP003438.1-201ENST00000518704 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
AP003438.1-201ENST00000518704 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
AP003438.1-201ENST00000518704 NACADO15069 1562 aa13.35□□□□□ -0.27
AP003438.1-201ENST00000518704 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
AP003438.1-201ENST00000518704 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.28
AP003438.1-201ENST00000518704 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
AP003438.1-201ENST00000518704 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
AP003438.1-201ENST00000518704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
AP003438.1-201ENST00000518704 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
AP003438.1-201ENST00000518704 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
AP003438.1-201ENST00000518704 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.33
AP003438.1-201ENST00000518704 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
AP003438.1-201ENST00000518704 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
AP003438.1-201ENST00000518704 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
AP003438.1-201ENST00000518704 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
AP003438.1-201ENST00000518704 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
AP003438.1-201ENST00000518704 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
AP003438.1-201ENST00000518704 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
AP003438.1-201ENST00000518704 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
AP003438.1-201ENST00000518704 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
AP003438.1-201ENST00000518704 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
AP003438.1-201ENST00000518704 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
AP003438.1-201ENST00000518704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
AP003438.1-201ENST00000518704 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
AP003438.1-201ENST00000518704 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
AP003438.1-201ENST00000518704 CUX2O14529 1486 aa12.55□□□□□ -0.4
AP003438.1-201ENST00000518704 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
AP003438.1-201ENST00000518704 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
AP003438.1-201ENST00000518704 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
AP003438.1-201ENST00000518704 CAPN15O75808 1086 aa12.5□□□□□ -0.41
AP003438.1-201ENST00000518704 APLP2Q06481 763 aa12.5□□□□□ -0.41
AP003438.1-201ENST00000518704 DSG3P32926 999 aa12.45□□□□□ -0.42
AP003438.1-201ENST00000518704 ERCC6Q03468 1493 aa12.45□□□□□ -0.42
AP003438.1-201ENST00000518704 ZBTB22O15209 634 aa12.43□□□□□ -0.42
AP003438.1-201ENST00000518704 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
AP003438.1-201ENST00000518704 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
AP003438.1-201ENST00000518704 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
AP003438.1-201ENST00000518704 NESP48681 1621 aa12.23□□□□□ -0.45
AP003438.1-201ENST00000518704 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
AP003438.1-201ENST00000518704 ABCB7O75027 752 aa12.22□□□□□ -0.45
AP003438.1-201ENST00000518704 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
AP003438.1-201ENST00000518704 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
AP003438.1-201ENST00000518704 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
AP003438.1-201ENST00000518704 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
AP003438.1-201ENST00000518704 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
AP003438.1-201ENST00000518704 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
AP003438.1-201ENST00000518704 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
AP003438.1-201ENST00000518704 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
AP003438.1-201ENST00000518704 POLA2Q14181 598 aa12.13□□□□□ -0.47
AP003438.1-201ENST00000518704 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
AP003438.1-201ENST00000518704 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
AP003438.1-201ENST00000518704 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
AP003438.1-201ENST00000518704 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
AP003438.1-201ENST00000518704 MROH2BQ7Z745 1585 aa12.04□□□□□ -0.48
AP003438.1-201ENST00000518704 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
AP003438.1-201ENST00000518704 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
AP003438.1-201ENST00000518704 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
AP003438.1-201ENST00000518704 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
AP003438.1-201ENST00000518704 WDR62O43379 1518 aa11.96□□□□□ -0.5
AP003438.1-201ENST00000518704 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
AP003438.1-201ENST00000518704 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
AP003438.1-201ENST00000518704 WIZO95785 1651 aa11.94□□□□□ -0.5
AP003438.1-201ENST00000518704 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
AP003438.1-201ENST00000518704 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
AP003438.1-201ENST00000518704 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.5
AP003438.1-201ENST00000518704 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
AP003438.1-201ENST00000518704 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
AP003438.1-201ENST00000518704 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
AP003438.1-201ENST00000518704 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
AP003438.1-201ENST00000518704 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
AP003438.1-201ENST00000518704 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
AP003438.1-201ENST00000518704 TOP2AP11388 1531 aaKnown RBP11.75□□□□□ -0.53
AP003438.1-201ENST00000518704 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
AP003438.1-201ENST00000518704 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms