Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 RPL5P7-201ENST00000444235 813 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC023968.1-201ENST00000560719 475 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC002519.2-203ENST00000567043 837 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 MIR4502-201ENST00000580432 81 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC093635.1-201ENST00000609028 555 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 MIR6729-201ENST00000618194 65 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC005614.1-201ENST00000598952 3653 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 RN7SKP232-201ENST00000410170 290 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AC084754.1-201ENST00000463466 464 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 RN7SL221P-201ENST00000466190 281 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 SCARNA5-201ENST00000516201 276 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 EEF1B2P2-201ENST00000519625 676 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AL121583.1-201ENST00000612444 682 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 AL512356.3-201ENST00000623005 461 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AKAP17BP-201ENST00000431706 2719 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AC074141.1-201ENST00000588129 2995 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AL451064.2-201ENST00000623514 1654 ntBASIC8.23□□□□□ -1.09
SNED1Q8TER0 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.23□□□□□ -1.09
SNED1Q8TER0 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SNED1Q8TER0 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 RBBP4P4-201ENST00000398588 1289 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 RPL21P50-201ENST00000417698 477 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 PNKDP1-201ENST00000435914 430 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 OR7A15P-201ENST00000449848 1009 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC018638.3-201ENST00000461273 132 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 H3F3AP3-201ENST00000497682 407 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 PTTG3P-201ENST00000521862 606 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 OR4A21P-201ENST00000532759 944 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC092718.4-201ENST00000566639 716 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC027243.2-201ENST00000602530 724 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 MIR7854-201ENST00000620068 65 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms