RNA–Protein interactions for RNA: ENST00000518217.1

AC087855.2-201, humanhuman

TSL 3 BASIC

Gene AC087855.2, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087855.2-201ENST00000518217 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
AC087855.2-201ENST00000518217 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
AC087855.2-201ENST00000518217 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
AC087855.2-201ENST00000518217 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
AC087855.2-201ENST00000518217 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
AC087855.2-201ENST00000518217 FOXD1Q16676 465 aa18.56■□□□□ 0.56
AC087855.2-201ENST00000518217 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
AC087855.2-201ENST00000518217 ADRA2BP18089 450 aa18.34■□□□□ 0.53
AC087855.2-201ENST00000518217 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
AC087855.2-201ENST00000518217 KCNA4P22459 653 aa17.54■□□□□ 0.4
AC087855.2-201ENST00000518217 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
AC087855.2-201ENST00000518217 MSH5O43196 834 aa17.06■□□□□ 0.32
AC087855.2-201ENST00000518217 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
AC087855.2-201ENST00000518217 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
AC087855.2-201ENST00000518217 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
AC087855.2-201ENST00000518217 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
AC087855.2-201ENST00000518217 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
AC087855.2-201ENST00000518217 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
AC087855.2-201ENST00000518217 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
AC087855.2-201ENST00000518217 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
AC087855.2-201ENST00000518217 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
AC087855.2-201ENST00000518217 ZBTB22O15209 634 aa16.19■□□□□ 0.18
AC087855.2-201ENST00000518217 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
AC087855.2-201ENST00000518217 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
AC087855.2-201ENST00000518217 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
AC087855.2-201ENST00000518217 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
AC087855.2-201ENST00000518217 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
AC087855.2-201ENST00000518217 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
AC087855.2-201ENST00000518217 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
AC087855.2-201ENST00000518217 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
AC087855.2-201ENST00000518217 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
AC087855.2-201ENST00000518217 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
AC087855.2-201ENST00000518217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
AC087855.2-201ENST00000518217 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
AC087855.2-201ENST00000518217 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
AC087855.2-201ENST00000518217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
AC087855.2-201ENST00000518217 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
AC087855.2-201ENST00000518217 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
AC087855.2-201ENST00000518217 FKBP8Q14318 412 aa14.87□□□□□ -0.03
AC087855.2-201ENST00000518217 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
AC087855.2-201ENST00000518217 APLP2Q06481 763 aa14.61□□□□□ -0.07
AC087855.2-201ENST00000518217 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
AC087855.2-201ENST00000518217 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
AC087855.2-201ENST00000518217 CACNB1Q02641 598 aaPredicted RBP14.5□□□□□ -0.09
AC087855.2-201ENST00000518217 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
AC087855.2-201ENST00000518217 AMER1Q5JTC6 1135 aaPredicted RBP14.48□□□□□ -0.09
AC087855.2-201ENST00000518217 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
AC087855.2-201ENST00000518217 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
AC087855.2-201ENST00000518217 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
AC087855.2-201ENST00000518217 CAPN15O75808 1086 aa14.34□□□□□ -0.11
AC087855.2-201ENST00000518217 POLA2Q14181 598 aa14.34□□□□□ -0.11
AC087855.2-201ENST00000518217 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
AC087855.2-201ENST00000518217 FBLN2P98095 1184 aa14.24□□□□□ -0.13
AC087855.2-201ENST00000518217 ABCB7O75027 752 aa14.16□□□□□ -0.14
AC087855.2-201ENST00000518217 PROM2Q8N271 834 aa14.16□□□□□ -0.14
AC087855.2-201ENST00000518217 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
AC087855.2-201ENST00000518217 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
AC087855.2-201ENST00000518217 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
AC087855.2-201ENST00000518217 DSG3P32926 999 aa14.01□□□□□ -0.17
AC087855.2-201ENST00000518217 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
AC087855.2-201ENST00000518217 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
AC087855.2-201ENST00000518217 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
AC087855.2-201ENST00000518217 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
AC087855.2-201ENST00000518217 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
AC087855.2-201ENST00000518217 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
AC087855.2-201ENST00000518217 SPDYE2Q495Y8 402 aa13.75□□□□□ -0.21
AC087855.2-201ENST00000518217 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
AC087855.2-201ENST00000518217 ABCC9O60706 1549 aa13.68□□□□□ -0.22
AC087855.2-201ENST00000518217 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
AC087855.2-201ENST00000518217 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
AC087855.2-201ENST00000518217 PKD2Q13563 968 aa13.62□□□□□ -0.23
AC087855.2-201ENST00000518217 STAG3Q9UJ98 1225 aa13.62□□□□□ -0.23
AC087855.2-201ENST00000518217 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
AC087855.2-201ENST00000518217 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
AC087855.2-201ENST00000518217 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
AC087855.2-201ENST00000518217 MIER1Q8N108 512 aa13.49□□□□□ -0.25
AC087855.2-201ENST00000518217 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
AC087855.2-201ENST00000518217 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
AC087855.2-201ENST00000518217 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
AC087855.2-201ENST00000518217 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
AC087855.2-201ENST00000518217 RGL2O15211 777 aa13.28□□□□□ -0.28
AC087855.2-201ENST00000518217 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
AC087855.2-201ENST00000518217 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
AC087855.2-201ENST00000518217 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
AC087855.2-201ENST00000518217 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
AC087855.2-201ENST00000518217 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
AC087855.2-201ENST00000518217 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
AC087855.2-201ENST00000518217 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
AC087855.2-201ENST00000518217 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
AC087855.2-201ENST00000518217 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
AC087855.2-201ENST00000518217 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
AC087855.2-201ENST00000518217 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
AC087855.2-201ENST00000518217 NUBP1P53384 320 aa13.13□□□□□ -0.31
AC087855.2-201ENST00000518217 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
AC087855.2-201ENST00000518217 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
AC087855.2-201ENST00000518217 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
AC087855.2-201ENST00000518217 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.31
AC087855.2-201ENST00000518217 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
AC087855.2-201ENST00000518217 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
AC087855.2-201ENST00000518217 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms