Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZNF300P1-201ENST00000356555 1822 ntBASIC7.15□□□□□ -1.27
ATG4DQ86TL0 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 RNU11-6P-201ENST00000391127 133 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 ZNF192P2-201ENST00000402215 1383 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AL451046.1-201ENST00000406097 534 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AL008987.1-201ENST00000415528 237 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 RPSAP59-201ENST00000421048 890 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 YBX1P8-201ENST00000421881 943 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 MTND3P10-201ENST00000450967 341 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 PTGES3P5-201ENST00000455109 434 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 RARRES2P3-201ENST00000457739 473 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AL031073.1-201ENST00000503029 1139 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC091951.3-201ENST00000504093 246 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 PGBD4P4-201ENST00000509673 613 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 SRMP2-201ENST00000553832 916 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC135628.1-201ENST00000568867 534 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 TUBAP4-201ENST00000569261 416 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC108747.1-201ENST00000609508 535 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC004839.1-201ENST00000610269 501 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 RN7SL3-201ENST00000610674 299 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AL354976.1-201ENST00000613843 387 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 RN7SL820P-201ENST00000616437 299 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC067852.7-201ENST00000623270 535 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC092999.1-201ENST00000624004 1924 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC090897.3-201ENST00000636973 1157 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 OR6M2P-202ENST00000641780 2063 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC138627.1-203ENST00000641872 1680 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ATG4DQ86TL0 TNFSF15-201ENST00000374044 2789 ntBASIC7.14□□□□□ -1.27
ATG4DQ86TL0 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 AC087501.5-201ENST00000607496 2374 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 YES1P1-201ENST00000418510 1628 ntBASIC7.13□□□□□ -1.27
ATG4DQ86TL0 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
ATG4DQ86TL0 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms