RNA–Protein interactions for RNA: ENST00000444266.1

LINC01628-201, Transcript of long intergenic non-protein coding RNA 1628, humanhuman

TSL 2 BASIC

Gene LINC01628, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01628-201ENST00000444266 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
LINC01628-201ENST00000444266 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
LINC01628-201ENST00000444266 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
LINC01628-201ENST00000444266 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
LINC01628-201ENST00000444266 FOXD1Q16676 465 aa22.34■■□□□ 1.17
LINC01628-201ENST00000444266 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
LINC01628-201ENST00000444266 MSH5O43196 834 aa21.16■□□□□ 0.98
LINC01628-201ENST00000444266 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
LINC01628-201ENST00000444266 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
LINC01628-201ENST00000444266 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
LINC01628-201ENST00000444266 ADRA2BP18089 450 aa20.44■□□□□ 0.86
LINC01628-201ENST00000444266 DMRT2Q9Y5R5 561 aa18.95■□□□□ 0.62
LINC01628-201ENST00000444266 MAPK8IP2Q13387 824 aaPredicted RBP18.87■□□□□ 0.61
LINC01628-201ENST00000444266 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
LINC01628-201ENST00000444266 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
LINC01628-201ENST00000444266 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
LINC01628-201ENST00000444266 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
LINC01628-201ENST00000444266 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
LINC01628-201ENST00000444266 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
LINC01628-201ENST00000444266 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
LINC01628-201ENST00000444266 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
LINC01628-201ENST00000444266 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
LINC01628-201ENST00000444266 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
LINC01628-201ENST00000444266 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
LINC01628-201ENST00000444266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC01628-201ENST00000444266 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
LINC01628-201ENST00000444266 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
LINC01628-201ENST00000444266 DSG3P32926 999 aa16.67■□□□□ 0.26
LINC01628-201ENST00000444266 CAPN15O75808 1086 aa16.66■□□□□ 0.26
LINC01628-201ENST00000444266 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
LINC01628-201ENST00000444266 POTEHQ6S545 545 aa16.6■□□□□ 0.25
LINC01628-201ENST00000444266 APLP2Q06481 763 aa16.41■□□□□ 0.22
LINC01628-201ENST00000444266 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
LINC01628-201ENST00000444266 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
LINC01628-201ENST00000444266 KCNA4P22459 653 aa16.31■□□□□ 0.2
LINC01628-201ENST00000444266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
LINC01628-201ENST00000444266 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
LINC01628-201ENST00000444266 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
LINC01628-201ENST00000444266 ABCB7O75027 752 aa16.19■□□□□ 0.18
LINC01628-201ENST00000444266 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
LINC01628-201ENST00000444266 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
LINC01628-201ENST00000444266 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
LINC01628-201ENST00000444266 POLA2Q14181 598 aa15.76■□□□□ 0.11
LINC01628-201ENST00000444266 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
LINC01628-201ENST00000444266 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
LINC01628-201ENST00000444266 AKT1S1Q96B36 256 aa15.52■□□□□ 0.08
LINC01628-201ENST00000444266 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
LINC01628-201ENST00000444266 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
LINC01628-201ENST00000444266 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
LINC01628-201ENST00000444266 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
LINC01628-201ENST00000444266 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
LINC01628-201ENST00000444266 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
LINC01628-201ENST00000444266 PIP4P2Q8N4L2 257 aa15.26■□□□□ 0.03
LINC01628-201ENST00000444266 PITPNM1O00562 1244 aa15.15■□□□□ 0.02
LINC01628-201ENST00000444266 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
LINC01628-201ENST00000444266 HAX1O00165 279 aa15.09■□□□□ 0.01
LINC01628-201ENST00000444266 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
LINC01628-201ENST00000444266 SPDYE2BA6NHP3 402 aa14.97□□□□□ -0.01
LINC01628-201ENST00000444266 ZBTB22O15209 634 aa14.97□□□□□ -0.01
LINC01628-201ENST00000444266 SPDYE6P0CI01 402 aa14.97□□□□□ -0.01
LINC01628-201ENST00000444266 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
LINC01628-201ENST00000444266 FBLN2P98095 1184 aa14.92□□□□□ -0.02
LINC01628-201ENST00000444266 EVX2Q03828 476 aa14.81□□□□□ -0.04
LINC01628-201ENST00000444266 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
LINC01628-201ENST00000444266 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
LINC01628-201ENST00000444266 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
LINC01628-201ENST00000444266 SSUH2Q9Y2M2 353 aa14.7□□□□□ -0.06
LINC01628-201ENST00000444266 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
LINC01628-201ENST00000444266 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
LINC01628-201ENST00000444266 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
LINC01628-201ENST00000444266 GABBR2O75899 941 aa14.52□□□□□ -0.09
LINC01628-201ENST00000444266 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
LINC01628-201ENST00000444266 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
LINC01628-201ENST00000444266 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
LINC01628-201ENST00000444266 LHX8Q68G74 356 aa14.4□□□□□ -0.1
LINC01628-201ENST00000444266 CLCN6P51797 869 aa14.31□□□□□ -0.12
LINC01628-201ENST00000444266 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
LINC01628-201ENST00000444266 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
LINC01628-201ENST00000444266 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
LINC01628-201ENST00000444266 ZNF579Q8NAF0 562 aaKnown RBP14.08□□□□□ -0.16
LINC01628-201ENST00000444266 DCBLD2Q96PD2 775 aa14.07□□□□□ -0.16
LINC01628-201ENST00000444266 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
LINC01628-201ENST00000444266 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
LINC01628-201ENST00000444266 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
LINC01628-201ENST00000444266 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
LINC01628-201ENST00000444266 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
LINC01628-201ENST00000444266 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
LINC01628-201ENST00000444266 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
LINC01628-201ENST00000444266 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
LINC01628-201ENST00000444266 OTUD5Q96G74 571 aa13.76□□□□□ -0.21
LINC01628-201ENST00000444266 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
LINC01628-201ENST00000444266 PHF12Q96QT6 1004 aa13.73□□□□□ -0.21
LINC01628-201ENST00000444266 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
LINC01628-201ENST00000444266 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
LINC01628-201ENST00000444266 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
LINC01628-201ENST00000444266 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
LINC01628-201ENST00000444266 POTEMA6NI47 508 aa13.57□□□□□ -0.24
LINC01628-201ENST00000444266 C7P10643 843 aa13.57□□□□□ -0.24
LINC01628-201ENST00000444266 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
LINC01628-201ENST00000444266 MS4A3Q96HJ5 214 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms