Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 RPS10P21-201ENST00000430654 475 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 SNRPBP1-201ENST00000443634 282 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.93□□□□□ -1.14
CCNA1P78396 RPL37P23-201ENST00000492641 294 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 AC146944.3-201ENST00000509969 371 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 GUSBP9-201ENST00000510138 584 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
CCNA1P78396 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CCNA1P78396 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 MIR3154-201ENST00000577829 84 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.93□□□□□ -1.14
CCNA1P78396 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.93□□□□□ -1.14
CCNA1P78396 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.93□□□□□ -1.14
CCNA1P78396 AC089999.3-201ENST00000622440 577 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 AC073593.1-201ENST00000624500 411 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 AC119674.1-201ENST00000641611 1210 ntBASIC7.93□□□□□ -1.14
CCNA1P78396 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.93□□□□□ -1.14
CCNA1P78396 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.93□□□□□ -1.14
CCNA1P78396 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.93□□□□□ -1.14
CCNA1P78396 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CCNA1P78396 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CCNA1P78396 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CCNA1P78396 UBBP1-201ENST00000392399 473 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.92□□□□□ -1.14
CCNA1P78396 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.92□□□□□ -1.14
CCNA1P78396 RPSAP32-201ENST00000432681 526 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 RPL12P11-201ENST00000439970 501 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 RPL7L1P11-201ENST00000446092 721 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.92□□□□□ -1.14
CCNA1P78396 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.92□□□□□ -1.14
CCNA1P78396 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 AC099340.1-201ENST00000475247 599 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 RN7SL170P-201ENST00000487098 295 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 AC026774.2-201ENST00000513990 1098 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.92□□□□□ -1.14
CCNA1P78396 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.92□□□□□ -1.14
CCNA1P78396 NXPE2P1-201ENST00000543705 726 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 AC037479.1-201ENST00000558361 625 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 uc_338.29-201ENST00000615099 168 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 AC004943.1-203ENST00000624370 1074 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 RPSAP68-201ENST00000625020 438 ntBASIC7.92□□□□□ -1.14
CCNA1P78396 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.92□□□□□ -1.14
CCNA1P78396 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.92□□□□□ -1.14
CCNA1P78396 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.92□□□□□ -1.14
CCNA1P78396 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CCNA1P78396 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CCNA1P78396 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms