Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 TMEM179-206ENST00000616017 1645 ntBASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
LINC01558Q9Y6Z2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 TREX1-205ENST00000625293 1783 ntBASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
LINC01558Q9Y6Z2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 FP700111.2-201ENST00000619190 1892 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms