Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 AL353807.1-201ENST00000427475 662 ntBASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 MIR2861-201ENST00000636310 90 ntBASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX11Q9Y5W9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 AL049796.1-201ENST00000565336 1766 ntBASIC19.77■□□□□ 0.76
SNX11Q9Y5W9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 AL121906.2-201ENST00000621597 723 ntBASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX11Q9Y5W9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX11Q9Y5W9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 TMPOP1-202ENST00000424642 1267 ntBASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 AC073195.1-201ENST00000607241 877 ntBASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX11Q9Y5W9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms