Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDD3Q9Y3P4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDD3Q9Y3P4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDD3Q9Y3P4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDD3Q9Y3P4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.43■□□□□ 0.38
RHBDD3Q9Y3P4 CYP21A1P-202ENST00000354927 1481 ntBASIC17.43■□□□□ 0.38
RHBDD3Q9Y3P4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 AC087633.2-202ENST00000565166 1439 ntBASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 RARRES2P4-201ENST00000514074 484 ntBASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDD3Q9Y3P4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 PGM5P4-201ENST00000421970 445 ntBASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 AC007322.1-201ENST00000426983 750 ntBASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 AL356652.1-201ENST00000615962 565 ntBASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 AC231657.2-201ENST00000624556 255 ntBASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDD3Q9Y3P4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 IKBKGP1-201ENST00000612193 1073 ntBASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 AC092437.1-201ENST00000624794 1048 ntBASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 AL691432.2-201ENST00000607222 2038 ntBASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDD3Q9Y3P4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDD3Q9Y3P4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RHBDD3Q9Y3P4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDD3Q9Y3P4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms