Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 POU5F1P4-201ENST00000413175 1085 ntBASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 MIR4767-201ENST00000582827 78 ntBASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 AC116050.2-201ENST00000612102 1779 ntBASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCL1Q9Y2P8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCL1Q9Y2P8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 GUSBP5-201ENST00000418136 578 ntBASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCL1Q9Y2P8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.25■□□□□ 0.19
RCL1Q9Y2P8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 KRT8P36-201ENST00000489121 1440 ntBASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RCL1Q9Y2P8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms