Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 KRT18P57-201ENST00000443599 1254 ntBASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
CDK11AQ9UQ88 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 ERF-202ENST00000440177 2032 ntTSL 2 BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 MESTP1-201ENST00000404287 994 ntBASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDK11AQ9UQ88 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 DGCR10-201ENST00000609839 495 ntBASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDK11AQ9UQ88 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 AP005242.2-201ENST00000580065 1175 ntBASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 AC116351.2-201ENST00000606540 1585 ntBASIC30.9■■■□□ 2.54
CDK11AQ9UQ88 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CDK11AQ9UQ88 PLK5-205ENST00000642079 1969 ntBASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 YBX1P10-201ENST00000444752 975 ntBASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 CFL2-205ENST00000555765 632 ntTSL 2 BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CDK11AQ9UQ88 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
CDK11AQ9UQ88 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 C2orf69P3-201ENST00000565542 1120 ntBASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 TFP1-202ENST00000475455 1573 ntBASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CDK11AQ9UQ88 AC005229.4-201ENST00000610085 2198 ntBASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms