Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SSR3Q9UNL2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 AC009299.2-201ENST00000482477 511 ntBASIC17.75■□□□□ 0.43
SSR3Q9UNL2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.75■□□□□ 0.43
SSR3Q9UNL2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 AC245052.3-201ENST00000450182 901 ntBASIC17.74■□□□□ 0.43
SSR3Q9UNL2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 AC008175.2-201ENST00000612840 297 ntBASIC17.74■□□□□ 0.43
SSR3Q9UNL2 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 RARRES2P11-201ENST00000635158 484 ntBASIC17.74■□□□□ 0.43
SSR3Q9UNL2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.74■□□□□ 0.43
SSR3Q9UNL2 AC116050.2-201ENST00000612102 1779 ntBASIC17.74■□□□□ 0.43
SSR3Q9UNL2 AL032819.2-201ENST00000624543 2162 ntBASIC17.73■□□□□ 0.43
SSR3Q9UNL2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 POU5F1P4-201ENST00000413175 1085 ntBASIC17.73■□□□□ 0.43
SSR3Q9UNL2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SSR3Q9UNL2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SSR3Q9UNL2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms